PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g381370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 386aa MW: 41707.2 Da PI: 8.4876

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g381370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125	2.3e-39	23	83	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG +rnvPvG+grrknk+ss Pd.00g381370.m01 23 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGIMRNVPVGAGRRKNKNSS 83 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
LKSSNNGDQS EASCSQEKTL KKPDKILPCP RCNSMDTKFC YYNNYNVNQP RHFCKNCQRY 60 WTAGGIMRNV PVGAGRRKNK NSSASQYRHM LMSDALQTAR ASAANGAHNT TLGSNGTVLT 120 FGSDSPLCES MASVLNLAEQ AQNCTQSGFH RPEQRIGVSS IPGDNRDAHS SGSSITASNS 180 SERGGKVGLQ EPAIKSCQSF PPQVPCFPGS PWPYPWNSAQ WPSGMPPPPF CHSGFPISFY 240 PAPPYWGCTV PDSWNLPSLS SPSSALSHCA TSSGPNSPTL GKHSRDGDIL NPASSQNEDH 300 TKNNTSDRCV WIPKTLRIDD PSEAAKSSIW ATLGIKNEKG NCTNEGGLFR AFQSKGDEKN 360 HAVEASPVLQ ANPAALSRSL NFHERT

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

LKSSNNGDQS EASCSQEKTL KKPDKILPCP RCNSMDTKFC YYNNYNVNQP RHFCKNCQRY  60
WTAGGIMRNV PVGAGRRKNK NSSASQYRHM LMSDALQTAR ASAANGAHNT TLGSNGTVLT  120
FGSDSPLCES MASVLNLAEQ AQNCTQSGFH RPEQRIGVSS IPGDNRDAHS SGSSITASNS  180
SERGGKVGLQ EPAIKSCQSF PPQVPCFPGS PWPYPWNSAQ WPSGMPPPPF CHSGFPISFY  240
PAPPYWGCTV PDSWNLPSLS SPSSALSHCA TSSGPNSPTL GKHSRDGDIL NPASSQNEDH  300
TKNNTSDRCV WIPKTLRIDD PSEAAKSSIW ATLGIKNEKG NCTNEGGLFR AFQSKGDEKN  360
HAVEASPVLQ ANPAALSRSL NFHERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-100	Dof family protein