PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g381000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SRS
Protein Properties Length: 290aa    MW: 29480.3 Da    PI: 9.3453
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g381000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702222.11.2e-68712313153
            DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssa 94 
                       + t++CqdCGnqakkdC+h+RCRtCCksrgfdCathvkstWvpaa+rrerq +  aa   a +++ +++++k++r l  ++q+++s+t++s++
  Pd.00g381000.m01  71 ASTMTCQDCGNQAKKDCTHRRCRTCCKSRGFDCATHVKSTWVPAARRRERQLMSGAAGGGAGSNSgSTSSAKKPR-LVGASQTTTSHTSTSNT 162
                       5789************************************************99999999998884455555555.56999999********* PP

            DUF702  95 eskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                       +++++ +tss          lP +v+++avf+cvrv++v+dg++e+aYq++v+igGhvfkG+LydqG+e
  Pd.00g381000.m01 163 TPPRSYDTSSshqdagfkesLPGQVRAPAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGVE 231
                       ********999********************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MSSGQHRNNR SAGGGGGGIQ LWQQPQPHFF KKTPHDLAAT SLGGTHLVQG GGGGGVGNNV  60
MNSGSAAASG ASTMTCQDCG NQAKKDCTHR RCRTCCKSRG FDCATHVKST WVPAARRRER  120
QLMSGAAGGG AGSNSGSTSS AKKPRLVGAS QTTTSHTSTS NTTPPRSYDT SSSHQDAGFK  180
ESLPGQVRAP AVFKCVRVTA VEDGDDEYAY QAVVKIGGHV FKGFLYDQGV EGREGFPNIS  240
ELHLGGGGGT SGGGNGGRNG ASSPILDTSD VYGASSGGLL GGSNFGNPIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.11e-76SRS family protein