PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g380950.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 491aa MW: 55464.4 Da PI: 7.8894

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g380950.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.2	3.3e-19	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ ql +Le+++++++yp++e++ + A++lgL+e+q++ WF+ rR k+k+ Pd.00g380950.m01 20 KKRKLKTPAQLMALEKFYNEHKYPTEEMKSQVAEQLGLSEKQISGWFCHRRLKDKR 75 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MEESNELHSE ENKTSQDNNK KRKLKTPAQL MALEKFYNEH KYPTEEMKSQ VAEQLGLSEK 60 QISGWFCHRR LKDKRSSRDE TCANGRQDRS SGVIQDRASG LGQDSCGSTK HGDHRYVDPR 120 EVESRRLSGH DFPAADITRE YRSHYTERVG GMDNTSSESS SSLQDRFFTQ NEDPYDVETS 180 RYLAHNGVFS PINPRGTENM AYKPSGYLKV KGEAENAAIT AVKRQLGRHY LEDGPPLGVE 240 FDLLPPGAFE SPIMDSVHEP SIVGNPVLRS PDISGVKGQL SPRTRYEVYN SKFSSQDSYI 300 QQENPCIMHG FDLQEKKSSK KLRQKSTYIN HTNSSPGKNS SLDIYDKSVG GTSAYNPNRK 360 DKMRSKRGYS GRKVTSEQTE PCLHEYDRVS SPKLVQRSDY LKPKPSSSIE ENLDGECKAM 420 KVYSNPLRVM MNSTDEMVVA KQSRVNLPQR DYSTNSFPQL PPRKNQIKGT AMEMPSSFSE 480 DETAETNSSV D

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MEESNELHSE ENKTSQDNNK KRKLKTPAQL MALEKFYNEH KYPTEEMKSQ VAEQLGLSEK  60
QISGWFCHRR LKDKRSSRDE TCANGRQDRS SGVIQDRASG LGQDSCGSTK HGDHRYVDPR  120
EVESRRLSGH DFPAADITRE YRSHYTERVG GMDNTSSESS SSLQDRFFTQ NEDPYDVETS  180
RYLAHNGVFS PINPRGTENM AYKPSGYLKV KGEAENAAIT AVKRQLGRHY LEDGPPLGVE  240
FDLLPPGAFE SPIMDSVHEP SIVGNPVLRS PDISGVKGQL SPRTRYEVYN SKFSSQDSYI  300
QQENPCIMHG FDLQEKKSSK KLRQKSTYIN HTNSSPGKNS SLDIYDKSVG GTSAYNPNRK  360
DKMRSKRGYS GRKVTSEQTE PCLHEYDRVS SPKLVQRSDY LKPKPSSSIE ENLDGECKAM  420
KVYSNPLRVM MNSTDEMVVA KQSRVNLPQR DYSTNSFPQL PPRKNQIKGT AMEMPSSFSE  480
DETAETNSSV D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	3e-99	HB-other family protein