PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g380080.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 1007aa MW: 110688 Da PI: 7.563

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g380080.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.8	1.9e-18	440	540	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ + Pd.00g380080.m02 440 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIKIQDVKGNEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PG 530 99************************555556667***********99899999999.*******************887.77 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++lv++++++ Pd.00g380080.m02 531 GRLVMGFRKA 540 7788877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1007 aa Download sequence
MVPKVTSVCR FRLNSSLYVS GPTVVFKIWV LQIWTKKGFA GVEFGIMGSK ICMNVLCGTT 60 NTHEWKKGWP LRSGGFAHLC FKCGAAYEKL VYCDKFHAGE SGWRDCSLCR KPLHCGCIVS 120 KSLYECLDYG GVGCISCAKS SQPCVIQNDD VLNGFGGLKI SNYSDRQSTV VQNGAFSNTV 180 DEGKLLQLCK IMEANESNLL PQPQRGDINV SLVQKKQEEV INHKGEVGLG FSSTTQPSIG 240 SLTFSKSDNG RTMIEDMNKS SSQPSLSMTL GSPSATPSFV QPFPGGLVDG REQSKTPSSF 300 QQGHGREQGT TPSFQQGLVD GREQSKTSSS FQQGLVDGRE QSKTPSSFQQ GLVDGREQSK 360 TPSSFQQGQK SRPILPKPLK PGVTMSSETN KGGFPNVRVA RPPAEGRGKN QLLPRYWPRI 420 TDQELQKLSG DLNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS QSEGLPIKIQ 480 DVKGNEWMFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRIDPG GRLVMGFRKA 540 SKSLDMQDPQ TSILPNSSTP GETSCPSVVE NPATGSGHPG LFQTNTGSKD PHLHALSEHL 600 LLTDGDMSLH RNDYHGHRTS EDLLQQPVSN SDKKRARNIG PKSKRLLMHS EDVLELRLTW 660 EEAQDLLRPP QSVKPSIVTI EDHEFEEYDE PPVFGKRSLF IASSSERQEQ WAQCDDCSKW 720 RRLPADVLLP PKWTCSENSW DTSRRLCSAP EEMSQKDFDS LLRASKDLKK RRIIENCTET 780 QGHEPSGLDA LASAAILGDN VVDSGEQSVG ATTRHPRHRP GCTCIVCIQP PSGKGKHKPT 840 CTCNVCLTVR RRFKTLMMRK KKRQSEREAE NAQKDNNNHK DESEINGTTT EVGLHMNHSS 900 ENGGCQSRIE ADVAESSTAG QIDLNCEPNP YVQASGLTLS RLADAVSQPL NNYMKESCLA 960 NMMCEQQAGI GSSLLTQATD ESERRLSNEG CLSAVAAWDC EGRGDAD

Sequence ? help Back to Top

Protein Sequence Length: 1007 aa Download sequence

MVPKVTSVCR FRLNSSLYVS GPTVVFKIWV LQIWTKKGFA GVEFGIMGSK ICMNVLCGTT  60
NTHEWKKGWP LRSGGFAHLC FKCGAAYEKL VYCDKFHAGE SGWRDCSLCR KPLHCGCIVS  120
KSLYECLDYG GVGCISCAKS SQPCVIQNDD VLNGFGGLKI SNYSDRQSTV VQNGAFSNTV  180
DEGKLLQLCK IMEANESNLL PQPQRGDINV SLVQKKQEEV INHKGEVGLG FSSTTQPSIG  240
SLTFSKSDNG RTMIEDMNKS SSQPSLSMTL GSPSATPSFV QPFPGGLVDG REQSKTPSSF  300
QQGHGREQGT TPSFQQGLVD GREQSKTSSS FQQGLVDGRE QSKTPSSFQQ GLVDGREQSK  360
TPSSFQQGQK SRPILPKPLK PGVTMSSETN KGGFPNVRVA RPPAEGRGKN QLLPRYWPRI  420
TDQELQKLSG DLNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS QSEGLPIKIQ  480
DVKGNEWMFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRIDPG GRLVMGFRKA  540
SKSLDMQDPQ TSILPNSSTP GETSCPSVVE NPATGSGHPG LFQTNTGSKD PHLHALSEHL  600
LLTDGDMSLH RNDYHGHRTS EDLLQQPVSN SDKKRARNIG PKSKRLLMHS EDVLELRLTW  660
EEAQDLLRPP QSVKPSIVTI EDHEFEEYDE PPVFGKRSLF IASSSERQEQ WAQCDDCSKW  720
RRLPADVLLP PKWTCSENSW DTSRRLCSAP EEMSQKDFDS LLRASKDLKK RRIIENCTET  780
QGHEPSGLDA LASAAILGDN VVDSGEQSVG ATTRHPRHRP GCTCIVCIQP PSGKGKHKPT  840
CTCNVCLTVR RRFKTLMMRK KKRQSEREAE NAQKDNNNHK DESEINGTTT EVGLHMNHSS  900
ENGGCQSRIE ADVAESSTAG QIDLNCEPNP YVQASGLTLS RLADAVSQPL NNYMKESCLA  960
NMMCEQQAGI GSSLLTQATD ESERRLSNEG CLSAVAAWDC EGRGDAD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	850	861	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein