PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g375050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 678aa MW: 79232 Da PI: 6.8084

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g375050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.3	2.3e-22	342	424	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn YAk+ GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+v+++eleHnH ++ Pd.00g375050.m01 342 FYNCYAKQQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMDSNRWRVIEVELEHNHLIS 424 9*************99997.66779**********99888.....*********************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MIQRFGVGDH EWLRSLYEDR FRWAPVYLKE IFFAGMSAAR PGETLSPFFD RYVHKQTPLK 60 EFLDKYELAL QKKHKEEALA DIESRSSSPT LKTRCSFEFQ LSKVYTREIF KKFQFEVEEM 120 YSCFSTTQLH IDGPIIIFLV KERVVVEGNR REIRDYEVLY NRTAGEVRCI CSCFNFYGYL 180 CRHALCVLNF NGVEEIPSKY ILSRWKKDFK RIYIPDHGSS NADDTDRMQW FNQLYRSALQ 240 IVEEGVISLD HYKPLCTSRA TFLAERVYLP IFRKLSRDSR SDMDEVSLNT EPAGDDDADE 300 FEIEGDCAMT DFISQTGIIQ GENPLPPVVG MEFDSYEDVY YFYNCYAKQQ GFGVRVSNTW 360 YRKSKERYRG KLSCSSAGFK KKSEANRPRP ETRTGCPAMI KFRLMDSNRW RVIEVELEHN 420 HLISPASGKF YKSHKSVGVG TKRALQLDTA EEVQKIRLFR TVIIDSEDKY DQALQTHHRL 480 EALADLDSRN SSYMLKSRCY FELQLSKVYT NDILRKFESE VEGMYSCFST SQLNPDGPVI 540 TYIVKEQTEV DGNRREVRDY EVLYNPSEME VLCICGMFNL RGYLCRHTLS VLNQNGVEEI 600 PAQYVLSRWR KDIKRNYIFD HSCSGIDINN PVHRYDHLYK CIVQVVEEGR KSQDRYKVAF 660 GALDEILNKL CPTEDPAL

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MIQRFGVGDH EWLRSLYEDR FRWAPVYLKE IFFAGMSAAR PGETLSPFFD RYVHKQTPLK  60
EFLDKYELAL QKKHKEEALA DIESRSSSPT LKTRCSFEFQ LSKVYTREIF KKFQFEVEEM  120
YSCFSTTQLH IDGPIIIFLV KERVVVEGNR REIRDYEVLY NRTAGEVRCI CSCFNFYGYL  180
CRHALCVLNF NGVEEIPSKY ILSRWKKDFK RIYIPDHGSS NADDTDRMQW FNQLYRSALQ  240
IVEEGVISLD HYKPLCTSRA TFLAERVYLP IFRKLSRDSR SDMDEVSLNT EPAGDDDADE  300
FEIEGDCAMT DFISQTGIIQ GENPLPPVVG MEFDSYEDVY YFYNCYAKQQ GFGVRVSNTW  360
YRKSKERYRG KLSCSSAGFK KKSEANRPRP ETRTGCPAMI KFRLMDSNRW RVIEVELEHN  420
HLISPASGKF YKSHKSVGVG TKRALQLDTA EEVQKIRLFR TVIIDSEDKY DQALQTHHRL  480
EALADLDSRN SSYMLKSRCY FELQLSKVYT NDILRKFESE VEGMYSCFST SQLNPDGPVI  540
TYIVKEQTEV DGNRREVRDY EVLYNPSEME VLCICGMFNL RGYLCRHTLS VLNQNGVEEI  600
PAQYVLSRWR KDIKRNYIFD HSCSGIDINN PVHRYDHLYK CIVQVVEEGR KSQDRYKVAF  660
GALDEILNKL CPTEDPAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-136	FAR1 family protein