PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g374370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 413aa MW: 45638.3 Da PI: 9.1953

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g374370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.6	4.1e-15	89	148	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g374370.m01 89 SQFRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 148 789****************655454478446***********************98 PP
2	AP2	48.7	1.9e-15	191	242	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g374370.m01 191 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 242 78**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MYKSWLGQTV PFSDEKSTPR GDHHQANGNS FHQSSLSLTM SPSLQQNGNN MGAISQLQIV 60 ESKKRPVGKS AAREPVPRKS IDTFGQRTSQ FRGVTRHRWT GRYEAHLWDN SCRKEGQTRK 120 GRQVYLGGYD KEEKAARAYD LAALKYWGST THINFPLSTY EKELEEMKNM TRQEFVANLR 180 RKSSGFSRGA SVYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF 240 RGTSAVTNFD MSRYDVKRIC SSSTLIASEL AKRSPKDSTL AAIEDFNSCG SSTSAQPLLA 300 IASGEPCDDM AEMVWNNNNA EDHSHSHHEN SNTTNNNAAL GASSSRNSSS PQSPKCSFGH 360 TSEFGLGGGD YSHAYFSLQG AKYEDGNGGG NDHSRLGNLG LVPQVPMFAL WND

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MYKSWLGQTV PFSDEKSTPR GDHHQANGNS FHQSSLSLTM SPSLQQNGNN MGAISQLQIV  60
ESKKRPVGKS AAREPVPRKS IDTFGQRTSQ FRGVTRHRWT GRYEAHLWDN SCRKEGQTRK  120
GRQVYLGGYD KEEKAARAYD LAALKYWGST THINFPLSTY EKELEEMKNM TRQEFVANLR  180
RKSSGFSRGA SVYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF  240
RGTSAVTNFD MSRYDVKRIC SSSTLIASEL AKRSPKDSTL AAIEDFNSCG SSTSAQPLLA  300
IASGEPCDDM AEMVWNNNNA EDHSHSHHEN SNTTNNNAAL GASSSRNSSS PQSPKCSFGH  360
TSEFGLGGGD YSHAYFSLQG AKYEDGNGGG NDHSRLGNLG LVPQVPMFAL WND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-132	AP2 family protein