PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g371010.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 439aa MW: 47654.8 Da PI: 5.4322

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g371010.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.2	6.1e-23	158	196	1	39
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrs 39 d+ep+rC+RtDGKkWRCsr+v +++k+CErH h++r++ Pd.00g371010.m01 158 DPEPWRCKRTDGKKWRCSRDVAPDQKYCERHAHKSRNQP 196 79**********************************986 PP
2	QLQ	52.7	1.3e-18	100	133	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT+aQ ++L++Q ++y+y+++++PvPp+Ll++i Pd.00g371010.m01 100 PFTPAQREELERQTMIYRYMMSSAPVPPHLLVPI 133 8********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MGKRNGFVVA SEKGTAEETT ECCDIGGGSF GGEGCGVFEH SASGPLFCNT SNPVTSCISD 60 ICNAVGSDFG SVVPKSLQQP YSDHSLSFSP SGGMVNVRLP FTPAQREELE RQTMIYRYMM 120 SSAPVPPHLL VPIAKNPSNV AHLDPNCSLE LGFSSNSDPE PWRCKRTDGK KWRCSRDVAP 180 DQKYCERHAH KSRNQPTPFS TNMVSPTVPS HAQPRSMDWF MKGETPTAPT AGGSNQEWEQ 240 MMQFKLGLKS CYTKCNADVD VSKQQNESSF NLYREYTGES QGLQTQRPSH DQYGLLLSPK 300 LAHLEGALNS NQTQQTRHFI DAWSTTTERD SSIGEIGNRG YVSSNQKLPF SSLTLSMSRG 360 NETNEETDNT QMGLGILGSE RENVGDLESQ WMNPLSCMSS PPGGPLAEAL CLGIASSTRA 420 TSSNGCISDS TSSGDGVYT

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MGKRNGFVVA SEKGTAEETT ECCDIGGGSF GGEGCGVFEH SASGPLFCNT SNPVTSCISD  60
ICNAVGSDFG SVVPKSLQQP YSDHSLSFSP SGGMVNVRLP FTPAQREELE RQTMIYRYMM  120
SSAPVPPHLL VPIAKNPSNV AHLDPNCSLE LGFSSNSDPE PWRCKRTDGK KWRCSRDVAP  180
DQKYCERHAH KSRNQPTPFS TNMVSPTVPS HAQPRSMDWF MKGETPTAPT AGGSNQEWEQ  240
MMQFKLGLKS CYTKCNADVD VSKQQNESSF NLYREYTGES QGLQTQRPSH DQYGLLLSPK  300
LAHLEGALNS NQTQQTRHFI DAWSTTTERD SSIGEIGNRG YVSSNQKLPF SSLTLSMSRG  360
NETNEETDNT QMGLGILGSE RENVGDLESQ WMNPLSCMSS PPGGPLAEAL CLGIASSTRA  420
TSSNGCISDS TSSGDGVYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	1e-39	GRF family protein