PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g371000.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 428aa MW: 46820.1 Da PI: 6.5028

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g371000.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.2	5.9e-23	163	201	1	39
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrs 39 d+ep+rC+RtDGKkWRCsr+v +++k+CErH h++r++ Pd.00g371000.m01 163 DPEPWRCKRTDGKKWRCSRDVAPDQKYCERHAHKSRNQP 201 79**********************************986 PP
2	QLQ	52.8	1.2e-18	102	135	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT+aQ ++L++Q ++y+y+++++PvPp+Ll++i Pd.00g371000.m01 102 PFTPAQREELERQTMIYRYMMSSAPVPPHLLVPI 135 8********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MGKRNGFVVA SEKGTAEETT ECCDVGGGSF GGEGCGVFEH SASGPLFCNT SNPVTSCISD 60 IYNAVGSDFG SVVPKSLQQP YSDHSLSFSP SGGMVNVNVR LPFTPAQREE LERQTMIYRY 120 MMSSAPVPPH LLVPIAKNPS NVAHLYPNLV RGSLELGFSS NSDPEPWRCK RTDGKKWRCS 180 RDVAPDQKYC ERHAHKSRNQ PTPFSTNMVS PTVPSHAQPR SMDWFMKGET PTAPTAGGSN 240 QEWEQMMQFK LGLKSCYTKC NADVDVSKQQ NESSFNLYRE YTGESQGLQT QRPSHDQYGL 300 LLSPKLAHLE GALNSNQTQQ TRHFIDAWST TTERDSSIGE IGNRGYVSSN QKLPFSSLTL 360 SMSRGNETNE ETDNTQMGLG ILGSERENVG DLKSQWMNPL SCMSSPPGGP LAEALCLGIA 420 SSTRSNIL

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MGKRNGFVVA SEKGTAEETT ECCDVGGGSF GGEGCGVFEH SASGPLFCNT SNPVTSCISD  60
IYNAVGSDFG SVVPKSLQQP YSDHSLSFSP SGGMVNVNVR LPFTPAQREE LERQTMIYRY  120
MMSSAPVPPH LLVPIAKNPS NVAHLYPNLV RGSLELGFSS NSDPEPWRCK RTDGKKWRCS  180
RDVAPDQKYC ERHAHKSRNQ PTPFSTNMVS PTVPSHAQPR SMDWFMKGET PTAPTAGGSN  240
QEWEQMMQFK LGLKSCYTKC NADVDVSKQQ NESSFNLYRE YTGESQGLQT QRPSHDQYGL  300
LLSPKLAHLE GALNSNQTQQ TRHFIDAWST TTERDSSIGE IGNRGYVSSN QKLPFSSLTL  360
SMSRGNETNE ETDNTQMGLG ILGSERENVG DLKSQWMNPL SCMSSPPGGP LAEALCLGIA  420
SSTRSNIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	8e-43	GRF family protein