PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g369390.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MIKC_MADS
Protein Properties Length: 201aa    MW: 23299.6 Da    PI: 10.1883
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g369390.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.61.6e-28959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien + rqvtfskRrng+lKKA+ELSvLCdaeva+ii+s++gk+y ++s
  Pd.00g369390.m01  9 KRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIILSPSGKIYQFAS 59
                      79***********************************************86 PP
2K-box622.3e-219317617100
             K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                        ++e + L++ i+nL+  +++l Ge+L+ L ++eL+qLe+qL++++++iRs+  +++ ++i+ l+kk k+lqeen +L+k++ e
  Pd.00g369390.m01  93 TNNENEELRRSIDNLEMRLKNLAGEELDMLGMQELKQLERQLKTGVERIRSQIGRVVSDNISSLKKKHKALQEENSRLQKRFHE 176
                       678999*************************************************************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MGRGKVELKR IENPTSRQVT FSKRRNGLLK KAFELSVLCD AEVALIILSP SGKIYQFASH  60
DINRTIAMYR NQVSLPESNN SSFRQARTME FGTNNENEEL RRSIDNLEMR LKNLAGEELD  120
MLGMQELKQL ERQLKTGVER IRSQIGRVVS DNISSLKKKH KALQEENSRL QKRFHELHYA  180
DHESSRILGP NAYMQFFPSE F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-45MIKC_MADS family protein