PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g364250.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 211aa MW: 24339.7 Da PI: 9.9556 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 97.1 | 2e-30 | 42 | 129 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vkkek+gkw vt++++eHnH+l+ Pd.00g364250.m01 42 FYDAYATHLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKTRPKR-SENRKPRAITREGCKAMIVVKKEKSGKWIVTRFVKEHNHPLV 129 9*******************************************99.9***************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MSKDEDVIES SNGKDAVTSE GNSDTEPYVG MEFESEEAAK VFYDAYATHL GFIMRVDAFR 60 RSMRDGKVVW RRLVCNKEGF RKTRPKRSEN RKPRAITREG CKAMIVVKKE KSGKWIVTRF 120 VKEHNHPLVV TPANGRRTVL LSQTPDEKDV KIRELMAELQ RERKRSAAYQ EQLDMVLREM 180 EEHSNHLSRN IDGIVQSVKE IESKRVAPSN S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 1e-97 | FAR1 family protein |