PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g364230.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 218aa MW: 25219.7 Da PI: 5.2556 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.7 | 7.2e-27 | 51 | 139 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY+eYA++vGF +r+++ ++s+ +++i +r++ C+k+g+ + +++ + rr+r++tr gCka++ vk +k+gkw+vt+++++H+H+l Pd.00g364230.m01 51 DFYSEYARHVGFIMRIDQCRRSDVDKRILSRRLSCNKQGRYVKPRDQVRPVRRPRPSTREGCKAMMLVKVNKSGKWVVTRVVKDHTHPL 139 6***************************************999999999**************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MENGRPRPWL DLLSTDPKPT GAPETSAERD LNAVAEPYVG MEFDSEDAAK DFYSEYARHV 60 GFIMRIDQCR RSDVDKRILS RRLSCNKQGR YVKPRDQVRP VRRPRPSTRE GCKAMMLVKV 120 NKSGKWVVTR VVKDHTHPLI VSSGISMDER DMKIEQLTME LEREDQLCEL YHGLLLTLLD 180 NVEEQTELIS MKVSGIVNDV REFETEVERL PQNELDDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 5e-50 | FAR1 family protein |