PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g360290.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 147aa    MW: 16470.9 Da    PI: 4.495
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g360290.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.32.8e-1332120196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SSSEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgrsefel 92 
                       f+ vlt+s v  + +lv+p kf ++  +     +  t+ + +g+ We+ +   ++s+ y   ++Wk F+ +n+Lk+gD +vF+ l+  s+++l
  Pd.00g360290.m01  32 FDVVLTKSTVKPLYQLVVPGKFSATLPS----CTIPTILTFRGKNWEMIY--HGSSS-YKRLDNWKAFAIDNNLKVGDACVFEqLEC-SSTRL 116
                       78899*****************977742....2345777899********..66665.55555********************5444.55555 PP

                       EEEE CS
                B3  93 vvkv 96 
                       v++v
  Pd.00g360290.m01 117 VFRV 120
                       5443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MGEPQMGDLP TSNPVIELEG DEFWPLSGKP FFDVVLTKST VKPLYQLVVP GKFSATLPSC  60
TIPTILTFRG KNWEMIYHGS SSYKRLDNWK AFAIDNNLKV GDACVFEQLE CSSTRLVFRV  120
QILRGDIPSE FLDKLEGDNV DAPIVLE