PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g347220.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 715aa    MW: 81371.6 Da    PI: 6.1596
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g347220.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS393.42.4e-1203427132374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av+s d++ a++lL+++++++sp+gd++qRla+yf+ +L+arla+  +  y+ l + + s    +e l+a+++f+  sP+ ++s
  Pd.00g347220.m01 342 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRLAHYFADGLEARLAGARTPSYSPLISMQIS---AAEILKAYEVFVTSSPFRTVS 431
                       579***************************************************989999888888887...8******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +++aN++Il+ +e+e+r+H+iDf+is+G+QWp+++q L++Rp+gpp+lRiT+++ p++g   +e++eetg+rL+k+Ae+++vpfe+nv +a++
  Pd.00g347220.m01 432 NFLANRTILKLAEKETRLHVIDFGISYGFQWPCFIQRLSKRPSGPPKLRITAIEVPQPGfrPTERVEETGRRLKKYAERFNVPFEYNV-IAQK 523
                       **********************************************************9****************************9.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L+++++E+++Vn++ +l +++de+v ++s+rd vLkl+k+++P+++++   +  +ns+ F++rf eal ++salfd +ea++pre
  Pd.00g347220.m01 524 WETIQFEDLKIDRNEVIVVNCMNRLRHIPDETVMVNSPRDIVLKLIKKINPDLFIHGVVNGTYNSPFFVTRFREALFHFSALFDVFEASVPRE 616
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       +e r + E+++ g++i nvvaceg er+er et+++W+ r  +aGFk++pl++++ k++k++l+ ++  + +r++ee +++++gWk+r+++++
  Pd.00g347220.m01 617 DERRLMFEKAVYGKDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQEILKKVKRMLKFMGyHNDFRIDEEGHWILQGWKGRTIMAL 709
                       ****************************************************************9999999********************** PP

              GRAS 371 SaWr 374
                       S+W+
  Pd.00g347220.m01 710 SFWK 713
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MDSLLERYSL SLERFNFGHD SASLHCNQNL VNGFQVNQES TGQICLSTNL DHPSDSHTSL  60
SSGSDGDTTD ISDYNCPVIK YISDILLEED LEGKPCMLQD CLALQAAEKS FYDVLNQKDP  120
LSPKQPPLSV HQSFENSDDD SPRSCHSSNA SIAAKTNWVF DPSETSHVQS SLVQSLPDAA  180
LDSDSLSEMQ RLEYFGGLRE ASKFLPNVKF ETIDLKGCQL MPPGLNQWPP ATNTLMRRPD  240
NDDYSSTNRS KGKKNHQRDD GDYPEEGRSN KQPVAFADDS EPQEMFDEVL LCLGNHEFES  300
CSNDESLITE GSGKLQHNKQ SKGSKTEGSK KQNNNRELVD LSTLLTQCAQ AVASYDQRTA  360
SELLKQIRQH SSPYGDATQR LAHYFADGLE ARLAGARTPS YSPLISMQIS AAEILKAYEV  420
FVTSSPFRTV SNFLANRTIL KLAEKETRLH VIDFGISYGF QWPCFIQRLS KRPSGPPKLR  480
ITAIEVPQPG FRPTERVEET GRRLKKYAER FNVPFEYNVI AQKWETIQFE DLKIDRNEVI  540
VVNCMNRLRH IPDETVMVNS PRDIVLKLIK KINPDLFIHG VVNGTYNSPF FVTRFREALF  600
HFSALFDVFE ASVPREDERR LMFEKAVYGK DILNVVACEG LERVERPETY KQWQVRNVRA  660
GFKQLPLDQE ILKKVKRMLK FMGYHNDFRI DEEGHWILQG WKGRTIMALS FWKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein