PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g347200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 704aa    MW: 79751.5 Da    PI: 5.5375
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g347200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS378.49e-1163317022374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av+s d++ a++lL+++++++sp+gd++qR a+yf+ +L+arla+  +  y+ l + + s    +e l+a++++   sP+ ++s
  Pd.00g347200.m01 331 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRSAHYFADGLEARLAGARTPSYSPLVSMQIS---AAEILKAHEVYITSSPFKNLS 420
                       579***************************************************999999999999998...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +++aN++Il+ +e+++r+H+iDf+is+G+QWp++++ L++Rp+gpp+lRiT+++ p++g   +e++eetg+rL+k+Ae+++vpfe+nv va++
  Pd.00g347200.m01 421 NFLANRTILKLAEKATRLHVIDFGISYGFQWPCFIHRLSERPGGPPKLRITAIELPQPGfrPTERVEETGRRLEKYAERFNVPFEYNV-VAQK 512
                       **********************************************************9****************************9.8*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L+++++E+++Vn++ +l++++de+v ++s+rd vLkl+k+++P+++++   +  +ns+ F++rf eal ++salfd++e+ +pre
  Pd.00g347200.m01 513 WETIQFEDLKIDRNEVIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPDLFIHGVVNGTYNSPFFVTRFKEALFHFSALFDMFETCVPRE 605
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       +e r   E+++ gr+i nvvaceg er+er et+++W+ r  +aGFk++pl+++  k +k++l+ ++  + +r++e+ +++++gWk++   ++
  Pd.00g347200.m01 606 DERRLLFEKAVYGRDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQELLKRVKRMLKFMGyHNDFRIDEDGHWMLQGWKGKITRAL 698
                       ****************************************************************9999999********************** PP

              GRAS 371 SaWr 374
                       S+W+
  Pd.00g347200.m01 699 SFWK 702
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MDTLLERYYL SMERFNFGHG SASLDSNQNL VNGFQVNQES TSPVRLSTNL DHPSDSSTSL  60
SSGSDGDTID FSDYNHPVLK YVSDILLEED LEGKTCMLQD CLALQAAEKS FYDVLNQEDP  120
PSPNQLPLSV HQSFENSDDD SPHSCHRSNG FIAANTDWVF DPSETSNVQS SLVQSLSDAG  180
LISDSLSEMH SLGHSGGLGE ASKFLPNVKL EGNLLMPPGL DQWPSSTNIL MTTPDNDGYN  240
STNGSKGKKN HQREDADYPE EGRSNKQPVA FADDSEPQEM FDEVLLEFES CSPDESLITE  300
GSGKLQRNKQ KGSKTARSKK QNNNWELVDL STLLTQCAQA VASYDQRTAS ELLKQIRQHS  360
SPYGDATQRS AHYFADGLEA RLAGARTPSY SPLVSMQISA AEILKAHEVY ITSSPFKNLS  420
NFLANRTILK LAEKATRLHV IDFGISYGFQ WPCFIHRLSE RPGGPPKLRI TAIELPQPGF  480
RPTERVEETG RRLEKYAERF NVPFEYNVVA QKWETIQFED LKIDRNEVIV VNCMNRLKHI  540
PDETVMVNSP RDIVLKLIKK INPDLFIHGV VNGTYNSPFF VTRFKEALFH FSALFDMFET  600
CVPREDERRL LFEKAVYGRD ILNVVACEGL ERVERPETYK QWQVRNVRAG FKQLPLDQEL  660
LKRVKRMLKF MGYHNDFRID EDGHWMLQGW KGKITRALSF WKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein