PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g347190.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 768aa    MW: 87061 Da    PI: 5.7776
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g347190.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS361.31.4e-1103917651373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL+ cA+avss+d++ +++lL+++++++sp+gd  qRla++f++AL+ar+a++ +++     + ++++ +++++l+a+++   ++P+ ++
  Pd.00g347190.m01 391 LRNLLILCAQAVSSNDFRTTSELLKQVRQHSSPEGDGSQRLAHFFANALEARMAGTDTGTRMFYVSLASKRISVVDTLKAYQVHLSACPFKRI 483
                       6899***************************************************777777777777888788******************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s +  N++Il+ +e+++++Hi+Df+i +G+QWp L++ L++Rp+gpp+lRiTg++ p++g   ++ +eetg+ Lak++e+++vpfe+n+++++
  Pd.00g347190.m01 484 SIFFKNKMILKMAEKATTLHIVDFGILYGFQWPILIHHLSKRPGGPPKLRITGIEVPQPGfrPADWIEETGRHLAKYCERFNVPFEYNAIASQ 576
                       ***********************************************************9*9****************************999 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+++le+L+++++E+laVn++l+ ++llde+v+++ +rd+vLkl+++++P+++v++  + ++n++ F++rf eal ++sal+d+++ +++r
  Pd.00g347190.m01 577 NWESIKLEDLKTERNEVLAVNCMLRFKNLLDETVEVNCPRDSVLKLIRRMKPDIFVHTIVNGSYNAPFFVTRFREALFHFSALYDAFDINISR 669
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++eer + Ere+ gre++nv+aceg er+er et+++W+ r ++aG++p+pl++++ k  k  +r  + + + ++++s+++++gWk+r +++ 
  Pd.00g347190.m01 670 DNEERLMFEREFYGREAMNVIACEGLERVERPETYKQWQLRCTRAGLRPLPLDQDMLKIFKDKVRAWYHKDFVIDQDSDWMLQGWKGRIVYAS 762
                       ********************************************************************888********************** PP

              GRAS 371 SaW 373
                       S+W
  Pd.00g347190.m01 763 SCW 765
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    
MDPTINGVPD YTNGFNIDAE PFLPNSTQFP NLINEYQFNQ LSPDLNFLDN HFSLPSPDLE  60
PGNFVPSISV SSDGESFVPS TSLSPDGVSF APPVTTVSPG GDSSSDDNDY SETVSKFINQ  120
ILMEENIEKK PCMFYDPLGL RVTEKSFYDA LGQKYPSSPN QQPLYVDQNV ESPDDQKPFL  180
SQTSLPNDHT FQFNSHPNSQ LSVPLTNDLT SVGDELHVDN ALQGSSVNEF LAQNIFTDSE  240
SILQFNRGLE EARKFLPKDN QLVINLESNT TYPKVKRHAP TVIVKKEKSE RKNSPNGSWG  300
RKNHERGDVA PEEERSSKQS AVYIQESELS EMFDRVLLCT GGNNESPCDN VALQNEASQA  360
LQPSGHPQES NGNGGKARAK KQGKKKETVD LRNLLILCAQ AVSSNDFRTT SELLKQVRQH  420
SSPEGDGSQR LAHFFANALE ARMAGTDTGT RMFYVSLASK RISVVDTLKA YQVHLSACPF  480
KRISIFFKNK MILKMAEKAT TLHIVDFGIL YGFQWPILIH HLSKRPGGPP KLRITGIEVP  540
QPGFRPADWI EETGRHLAKY CERFNVPFEY NAIASQNWES IKLEDLKTER NEVLAVNCML  600
RFKNLLDETV EVNCPRDSVL KLIRRMKPDI FVHTIVNGSY NAPFFVTRFR EALFHFSALY  660
DAFDINISRD NEERLMFERE FYGREAMNVI ACEGLERVER PETYKQWQLR CTRAGLRPLP  720
LDQDMLKIFK DKVRAWYHKD FVIDQDSDWM LQGWKGRIVY ASSCWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein