PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g346390.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 276aa MW: 31379.2 Da PI: 6.8973 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.3 | 2.8e-16 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl Pd.00g346390.m01 26 KGPWTEQEDFNLVCFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 73 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.8e-17 | 79 | 124 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ Pd.00g346390.m01 79 RGKMTPQEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 124 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MRVTPTDQSL TSIVAFIVAD IRSIKKGPWT EQEDFNLVCF VGLFGDRRWD FIAKVSGLNR 60 TGKSCRLRWV NYLHPGLKRG KMTPQEERLV LELHSKWGNR WSRIARKLPG RTDNEIKNYW 120 RTHMRKKAQE KKRAASPSSS SSNCSSSSNI TSTEGGASFY DTGGLEIKAS SGAKKTGGDH 180 QEQEDDKKRD QKEYSLDDIW KDINLPEVNS IEPVYNDYSE EACNIISCPL MASPAPWEYC 240 SDSLWEMDEE ESKMFLPTTS DQFLSCFEYG KASLTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 3e-95 | MYB family protein |