PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g345760.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 452aa MW: 49387.5 Da PI: 6.0564

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g345760.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.5e-17	127	176	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Pd.00g345760.m01 127 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 176 78*****************......55**********************997 PP
2	AP2	40.2	8.6e-13	219	269	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g Pd.00g345760.m01 219 SRYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 269 79******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MLDLNLNVVG SGPNDVESCG TQMNESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN 60 FDILKVRGGE DEEDDVVVTK ELFPVTGALS KWPGQGQSSA SSSLVRKNLM ELGFDHGGSG 120 EVRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGVDAD 180 INYNLSDYEE DLKQMKNLTK EEFVHILRRQ STGFSRGSSR YRGVTLHKCG RWEARMGQFL 240 GKKYIYLGLF DSEVEAARAY DKAAIKCNGR EAVTNFEPST YEGEMISEAG NEDGDHNLDL 300 NLGISPPSFG NCQKEVEGHL QFHSGPYDGH NGNRMEHNVN ATMSDPPFKG LVMTSQHPPL 360 WNGVYPSYFS NQERATEKRI ALGSQGPPNW AWQMHGQVSA TPMPLFSTAA SSGFSFSATA 420 PSAAVHPLQP STPTALNLCF TSPATAAANT SQ

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MLDLNLNVVG SGPNDVESCG TQMNESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN  60
FDILKVRGGE DEEDDVVVTK ELFPVTGALS KWPGQGQSSA SSSLVRKNLM ELGFDHGGSG  120
EVRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGVDAD  180
INYNLSDYEE DLKQMKNLTK EEFVHILRRQ STGFSRGSSR YRGVTLHKCG RWEARMGQFL  240
GKKYIYLGLF DSEVEAARAY DKAAIKCNGR EAVTNFEPST YEGEMISEAG NEDGDHNLDL  300
NLGISPPSFG NCQKEVEGHL QFHSGPYDGH NGNRMEHNVN ATMSDPPFKG LVMTSQHPPL  360
WNGVYPSYFS NQERATEKRI ALGSQGPPNW AWQMHGQVSA TPMPLFSTAA SSGFSFSATA  420
PSAAVHPLQP STPTALNLCF TSPATAAANT SQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-118	AP2 family protein