PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g345020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 223aa MW: 26128.4 Da PI: 7.977 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.2 | 1.2e-17 | 10 | 140 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 f+FhPtd+e++ L k v +++ + + ++++ d++ + ePw++ + + + ++++++f ++ ++ + g+r++r + +g+W++ Pd.00g345020.m01 10 AFHFHPTDQEIIRSILYKMVIEREplnPSYHGIVHDEDLFGTkEPWKIWEdygRDQLHDQDLFFLCQLKRINDCGSRTHRrIGYEGTWSQRVA 102 69*****************988887765556679999*998779****74234334477899****************995566********* PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k +++ + + +g + L + + ++ + ++W+++ey+l Pd.00g345020.m01 103 PKLIYDGNPNPIGSVRKLRYKN--PKSKHDAEWFLDEYSL 140 ******9999**********84..444469********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MANSRNVSLA FHFHPTDQEI IRSILYKMVI EREPLNPSYH GIVHDEDLFG TKEPWKIWED 60 YGRDQLHDQD LFFLCQLKRI NDCGSRTHRR IGYEGTWSQR VAPKLIYDGN PNPIGSVRKL 120 RYKNPKSKHD AEWFLDEYSL FVGDDGHDQT TPGFDFVVCR LRRNHNKFDR IRASVHKKTN 180 KAPQQIHERK RKSMNVVINI DDDEEEEVVP HGCSSAKSHS CSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.1 | 9e-10 | NAC family protein |