PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g343710.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 365aa MW: 42240.8 Da PI: 4.4392

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g343710.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	54	5.6e-17	10	136	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 GfrF+Ptd e++ +L k v +k+ + ++vi+++++ +k eP+++ + + + +++++yf s+ ++ +g r +r+t +g+W++ Pd.00g343710.m01 10 LGFRFRPTDREIIGSFLYKMVVEKRpltsmPQYNKVIHKCNLfgNKREPSEIWRDYGGdqlTDQDLYFVSELQR---NGLRIQRKTGRGTWSE 99 6*****************99998898865566789833577*7533332225567788887766...799*********** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 t + ++v + +g k+ + + +g++++ ++ W+++ey+l Pd.00g343710.m01 100 TETYQNVDV-----IGRKRKFRYENGNTSE-DHAVWLLDEYSL 136 99888866.....******9998888.89******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MANSGVTQLL GFRFRPTDRE IIGSFLYKMV VEKRPLTSMP QYNKVIHKCN LFGNKREPSE 60 IWRDYGGDQL TDQDLYFVSE LQRNGLRIQR KTGRGTWSET ETYQNVDVIG RKRKFRYENG 120 NTSEDHAVWL LDEYSLFKKA CKNGTSSNCY DFDVVICRLR RKGNMDKSGK KRKCSSQDQS 180 NKKMKRDQST KEMKTENSVG PQIMNDERNQ SMINESTTYD QEYLIDTNYK SFDIDELFAE 240 LDREPPLLHS QQLSEIAESQ EEPCVNQFDG PVEAATSNLS NFEYNSDELA GLIGQYNMNA 300 DDYLDPNLFI DVDELLAEDA EPLSSFAELD DVHNVVSQPL DQNGYWSNSF MDQTYNSFME 360 EIMAD

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MANSGVTQLL GFRFRPTDRE IIGSFLYKMV VEKRPLTSMP QYNKVIHKCN LFGNKREPSE  60
IWRDYGGDQL TDQDLYFVSE LQRNGLRIQR KTGRGTWSET ETYQNVDVIG RKRKFRYENG  120
NTSEDHAVWL LDEYSLFKKA CKNGTSSNCY DFDVVICRLR RKGNMDKSGK KRKCSSQDQS  180
NKKMKRDQST KEMKTENSVG PQIMNDERNQ SMINESTTYD QEYLIDTNYK SFDIDELFAE  240
LDREPPLLHS QQLSEIAESQ EEPCVNQFDG PVEAATSNLS NFEYNSDELA GLIGQYNMNA  300
DDYLDPNLFI DVDELLAEDA EPLSSFAELD DVHNVVSQPL DQNGYWSNSF MDQTYNSFME  360
EIMAD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	185	RRKGNMDKSGKKRKCSSQDQSNKKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	2e-12	NAC family protein