PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g341110.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 591aa    MW: 66329.4 Da    PI: 4.7688
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g341110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS275.41.8e-8423058913374
              GRAS  13 ssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvsely.kalppsetsekn.sseelaalkl.fsevsPilkfshltaNqaI 102
                       s+++ e+a +lL+r   l+s++g++++R++ yf eAL++++ r++ +++ k l  +++ + +   ++ + +++  +   P+ ++++++  qaI
  Pd.00g341110.m01 230 SAEKYERAGKLLNRCDLLSSSTGNSVERVVYYFSEALREKIDRETGRVApKGLGNKPSFDVDmAMKRPNETSIaCQIKIPFGQVAQFAGIQAI 322
                       567899*************************************666555144433333333333333334444366678************** PP

              GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                       +e v+++++vH+iD++i +G+QW  L+qaLasR++ p   l+i ++g    +s++ +eetg+rL++fAe++++pf+f+++++ ++ dl+ ++L
  Pd.00g341110.m01 323 VENVAEAKKVHVIDLEIRNGVQWTGLMQALASRSDCPVeLLKISAIGT---SSRKLIEETGKRLESFAESMNLPFSFKLVMVPDMLDLKEDML 412
                       **********************************6655499*******...579999**********************9999********** PP

              GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                       +++++E++aV + +++ +++ ++  l+s     ++++k+++P v vv+e e +hns+ F++rf+eal ++ a fd++e+ + r++ +r+ +E 
  Pd.00g341110.m01 413 ELDSEETVAVYSEFAMRSMVPQPDRLAS----AMRVIKNIRPCVTVVTEVEGNHNSPVFVTRFIEALFFFGAYFDCVETCMERNDPNRMILES 501
                       *******************977777777....************************************************************* PP

              GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       +++g+ ++n+va+eg+er+ r+ +   Wr+ + + G++++ ls +   q++l+l++++ +   +v+ + ++l+ gWk+ pL s+S W+
  Pd.00g341110.m01 502 QYFGNGLRNIVAAEGEERKIRNVKIDVWRAFFARYGMEEIDLSPSSLYQVDLVLKNFScGSSCTVNMDGKCLLVGWKGTPLQSLSLWK 589
                       **********************************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    
MTNAMFSFEE FNFGGVQDKL SSTDKGSDTI MEEVKKIGKQ VHSYEADNWG DSRGFGSLGS  60
DYGFYGNNHY SSELLFPKFQ QQEEQQPLVS DYGLYDAMQF DALSPPFQAC LEEIAKLEDI  120
PTLVPHVEPK KEKRDFSSIA GLDLLNNYGS GFKRLNGERI FESSNYTDQV AGRKLSTEEI  180
MRVAGARFIR TSSQASGVAS MLSHPYEFSF SGLSVEETRD VELVEFLLAS AEKYERAGKL  240
LNRCDLLSSS TGNSVERVVY YFSEALREKI DRETGRVAPK GLGNKPSFDV DMAMKRPNET  300
SIACQIKIPF GQVAQFAGIQ AIVENVAEAK KVHVIDLEIR NGVQWTGLMQ ALASRSDCPV  360
ELLKISAIGT SSRKLIEETG KRLESFAESM NLPFSFKLVM VPDMLDLKED MLELDSEETV  420
AVYSEFAMRS MVPQPDRLAS AMRVIKNIRP CVTVVTEVEG NHNSPVFVTR FIEALFFFGA  480
YFDCVETCME RNDPNRMILE SQYFGNGLRN IVAAEGEERK IRNVKIDVWR AFFARYGMEE  540
IDLSPSSLYQ VDLVLKNFSC GSSCTVNMDG KCLLVGWKGT PLQSLSLWKF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.17e-49GRAS family protein