PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g338480.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 371aa MW: 41415.2 Da PI: 4.7653

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g338480.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	97.3	1.5e-30	185	274	3	95
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 qr+ws++Dei++L G+id+ ak+g++p +d+ af++f+kks++++++k+ql +KirrLKk+++++v+k gk+ + k+h+ k+f+ls+ki Pd.00g338480.m01 185 LQRIWSDDDEITILEGMIDYYAKQGVHPNADMFAFHDFMKKSLKADANKTQLQDKIRRLKKRYETNVAK---GKKYNPVKPHELKVFDLSMKI 274 69*****************************************************************...999999***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MAPNRPSPQD EPPEEVEASS EEEVDGEEEE ESGSESEEPE PKGAPTLAAE KKPPPKNPDL 60 ATVPQSSSPG SEEVEASSEE EVDREEEEES GSESEPEPPK AALAEKKPPP KKTDSAMENT 120 PKPRSKASAT TTPEQEPGRS GQARATPRIP RGPGRRRSQS WMRSRTMPEE MKKAGGDDSK 180 KPLLLQRIWS DDDEITILEG MIDYYAKQGV HPNADMFAFH DFMKKSLKAD ANKTQLQDKI 240 RRLKKRYETN VAKGKKYNPV KPHELKVFDL SMKIDSHVKR LDEDLNHFAE DLKQEGKIPP 300 DEPAVLPPLP IVPKNEKRKP IHKKEYAVPV DVEQPIDPNE PTYCVCHQVS FGDMIACDNE 360 NCQGGECKKI S

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MAPNRPSPQD EPPEEVEASS EEEVDGEEEE ESGSESEEPE PKGAPTLAAE KKPPPKNPDL  60
ATVPQSSSPG SEEVEASSEE EVDREEEEES GSESEPEPPK AALAEKKPPP KKTDSAMENT  120
PKPRSKASAT TTPEQEPGRS GQARATPRIP RGPGRRRSQS WMRSRTMPEE MKKAGGDDSK  180
KPLLLQRIWS DDDEITILEG MIDYYAKQGV HPNADMFAFH DFMKKSLKAD ANKTQLQDKI  240
RRLKKRYETN VAKGKKYNPV KPHELKVFDL SMKIDSHVKR LDEDLNHFAE DLKQEGKIPP  300
DEPAVLPPLP IVPKNEKRKP IHKKEYAVPV DVEQPIDPNE PTYCVCHQVS FGDMIACDNE  360
NCQGGECKKI S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	7e-25	GeBP family protein