PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g336440.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 305aa    MW: 33662.1 Da    PI: 7.0579
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g336440.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.4e-18184282195
                       EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k lt sd++ + +rlv+pkk+ae+h  ++++++++ + ++d +gr W+++++ +++s++   yvl+ G k++   n+ ++gD+v+F++++ 
  Pd.00g336440.m01 184 FEKSLTASDTFLNtARLVIPKKCAEAHfpKISETQGFPIAIQDYTGRDWKFQYRCWQNSNSkkmYVLE-GLKDYMILNQWQVGDTVTFHRTE- 274
                       899******998779**************99999*******************885555555548888.********************654. PP

                       SEE..EEE CS
                B3  88 sefelvvk 95 
                       +e++l ++
  Pd.00g336440.m01 275 QEGKLIIG 282
                       67767766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MASMASEHCF FCKAEIAEFI TGWPLKDGSF AKLCGKCGYA YIHDQFCETF HSKSDGWRHC  60
DGCKKRLHCG CIMSCHTYTE LDYGGVGCSK CLLRSKKSME SAANEGTYLT TLSDSDTHSV  120
VSNEIIAECC SPGSSKGKAS AHIGENSNVD SSGHTGCEGV ESETPPVDAS TQNHLSNIDA  180
IPLFEKSLTA SDTFLNTARL VIPKKCAEAH FPKISETQGF PIAIQDYTGR DWKFQYRCWQ  240
NSNSKKMYVL EGLKDYMILN QWQVGDTVTF HRTEQEGKLI IGTKKTPASI ASVQALKEKI  300
WKLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.11e-35B3 family protein