PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g328500.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 111aa    MW: 13321.4 Da    PI: 9.541
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g328500.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.92e-191470159
               NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewy 59
                      + pGfrFhPtdeelv +yL++k++++ l++ e ik+vdiyk++PwdLp +++ +++ w+
  Pd.00g328500.m02 14 MLPGFRFHPTDEELVGFYLRRKIQQRLLPI-ELIKQVDIYKYDPWDLP-RFSRRQTPWH 70
                      579***************************.89***************.5555566664 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MDEKNDMDKI DDVMLPGFRF HPTDEELVGF YLRRKIQQRL LPIELIKQVD IYKYDPWDLP  60
RFSRRQTPWH RELFLTLGGL HSRNLQQHLV YSIKVHTALS SAQRTCRAQL T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.19e-29NAC family protein