PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g327180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 341aa    MW: 38893.1 Da    PI: 6.8337
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g327180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS344.61.7e-1051433693374
              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++++++NqaI+ea+ege++vHiiD+   +++QW+ L+q+L++Rpegpp+lRiTg+++    +ke l ++ +rL++ A +l++pf+fn+ ++++
  Pd.00g327180.m01  14 VAYVVTNQAIVEAMEGEKMVHIIDLHSCEPAQWIYLIQTLNARPEGPPHLRITGIHE----QKEVLDQMFHRLTEEAGNLNIPFQFNP-IVSK 101
                       689******************************************************....9**************************.7999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrll....................................................desvsleserde 226
                       le+l++e+Lrvk+gEalaV++vlqlh+ll                                                      s +      +
  Pd.00g327180.m01 102 LENLDIESLRVKTGEALAVCSVLQLHSLLaaeddlrrksplasknlqkvlhmnkltlgewlekdpisaynlspdsalcplsGGSPK----MGS 190
                       *************************************************************************9887743333333....567 PP

              GRAS 227 vLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                       +L  +++lsPk++v++eqe++hn++++++r++eal++y alfd+le+++pr   er+kvE++l+g+ei+n++aceg+er+erhe+lekW  rl
  Pd.00g327180.m01 191 FLTSLWGLSPKLMVITEQESNHNGHTLMDRIMEALNFYGALFDCLESTVPRSPLERQKVEKMLFGEEIKNIIACEGTERTERHEKLEKWILRL 283
                       ********************************************************************************************* PP

              GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       e aGF+ vpls++ + qa++ l+ ++  g++++ee+g+lv++W+drpL+s+SaWr
  Pd.00g327180.m01 284 ELAGFGRVPLSYHGMLQARRQLQGYE--GFKIKEENGCLVICWHDRPLFSISAWR 336
                       *************************9..**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MRHLQTGCLK LGLVAYVVTN QAIVEAMEGE KMVHIIDLHS CEPAQWIYLI QTLNARPEGP  60
PHLRITGIHE QKEVLDQMFH RLTEEAGNLN IPFQFNPIVS KLENLDIESL RVKTGEALAV  120
CSVLQLHSLL AAEDDLRRKS PLASKNLQKV LHMNKLTLGE WLEKDPISAY NLSPDSALCP  180
LSGGSPKMGS FLTSLWGLSP KLMVITEQES NHNGHTLMDR IMEALNFYGA LFDCLESTVP  240
RSPLERQKVE KMLFGEEIKN IIACEGTERT ERHEKLEKWI LRLELAGFGR VPLSYHGMLQ  300
ARRQLQGYEG FKIKEENGCL VICWHDRPLF SISAWRFRRY E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-149GRAS family protein