PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g312560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 244aa MW: 28369.1 Da PI: 5.4479 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 32.7 | 1.4e-10 | 4 | 71 | 26 | 99 |
T---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 26 hggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 hg ++ s ++ l+ +sg + e+kl r++ g+++++kGW eF k L+ g +vF+++g+s+f +v +f++ Pd.00g312560.m01 4 HG--EHLSDQIHLKLPSGSESEIKL--RRCAGEFWFEKGWPEFSKFCSLDFGSCLVFRYEGKSKF--HVLIFDE 71 54..34677899*************..*********************************99999..***9986 PP | |||||||
2 | B3 | 39.5 | 9.7e-13 | 167 | 243 | 17 | 98 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +p +f +++ + +++t++l r W v+l +++ y +++GW F kan LkegD+++F+l+++++ l v +fr Pd.00g312560.m01 167 HVPASFRKHFTPV--KNQTVRLLV-GDRLWPVTL--IFHPQNYRFSAGWGAFEKANWLKEGDICIFELMDKKNLVLEVNIFR 243 5788886555544..455788776.679******..66777799************************99999999999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MDKHGEHLSD QIHLKLPSGS ESEIKLRRCA GEFWFEKGWP EFSKFCSLDF GSCLVFRYEG 60 KSKFHVLIFD ESGTEIEYPI MPQIEGTDEE EDDDMSVEEI WEIEDDEEDN DKFVESLEIE 120 TDEKKNRRKP RSSSKPSSLR ATVKAANKFV ASHPFFKITL GPSRKAHVPA SFRKHFTPVK 180 NQTVRLLVGD RLWPVTLIFH PQNYRFSAGW GAFEKANWLK EGDICIFELM DKKNLVLEVN 240 IFRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49475.1 | 4e-19 | B3 family protein |