PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g307620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 313aa    MW: 35435.8 Da    PI: 10.4682
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g307620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.92e-148743399
                      -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      s  ++++ ++gr+W++ l+ ++ + +  +++GW +Fv++n+Lk gD++vF l+++ + ++ v +fr+
  Pd.00g307620.m01  8 SGNVMFRVLDGRTWSLGLKCERAKPKARFQSGWFKFVRENNLKIGDVCVFVLVDDIRLTFEVVIFRA 74
                      44799*************999999999**************************99888899999986 PP
2B351.22.3e-16192276489
                       E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
                B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                       v +++++ + g l +  k ++eh ++ +++   +l+ ++gr+W v l   k++++ + +++GW +Fv++n+L+ gD++vF ++++ ++
  Pd.00g307620.m01 192 VVMHPSYIRAGYLHIGAKVIKEHLLN-RGHENAILRVSDGRTWPVSL--GKQGKGiVRFQTGWMKFVQDNQLEIGDVCVFVMTNDiKR 276
                       567888889999***********666.455689**************..777777799**********************98877444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MTRLSNNSGN VMFRVLDGRT WSLGLKCERA KPKARFQSGW FKFVRENNLK IGDVCVFVLV  60
DDIRLTFEVV IFRAIEAANT LSPDVHGEQT MSEMEETDED YDSVELLDYF PPCPKTRKKS  120
PIAPQPSKKN RTCSISTAEN NIKSVGGPSR SQKFLKRRPQ VPRRMNPVTE SGTDRALLRA  180
KAFRSEYPSS TVVMHPSYIR AGYLHIGAKV IKEHLLNRGH ENAILRVSDG RTWPVSLGKQ  240
GKGIVRFQTG WMKFVQDNQL EIGDVCVFVM TNDIKRLIDV VLFRATEATK CTLSGEGNRR  300
PTISSSRKIK REA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-16B3 family protein