PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g305740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 264aa    MW: 30507.2 Da    PI: 5.828
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g305740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.61.6e-061976651
                      S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHH CS
          Homeobox  6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNr 51
                       ft++++ e+e+l +   ++ +s+e  ++LA++           ++t +qV+ WFqN+
  Pd.00g305740.m01 19 VFTHSEIMEMENLIKHprQQSLSQEFFQDLATSFsctpiragkpDITWEQVQSWFQNK 76
                      69***********99555***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MDMELFRTRK REPMNSLSVF THSEIMEMEN LIKHPRQQSL SQEFFQDLAT SFSCTPIRAG  60
KPDITWEQVQ SWFQNKQKEL QANSNSSPTA LELFVDLSDS NVSSNATENS QKPKGHPFCQ  120
YDVASFLSYR VVNSGELEVR VRYSGFGRED DEWVNVTRAV RERSIPLEAS ECHKVKVGDL  180
VLSFQEREHQ AVYCDAHVVD IQRGLHDVTG CKCIFVVRFD HDNTEEEIQL GRLCIRPAQN  240
TSAVTNTQQH DLFRNKDMKF SFLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.16e-49HB-other family protein