PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g301130.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 359aa MW: 39200.6 Da PI: 7.1794

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g301130.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.9	5.3e-34	90	144	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPk+i+++m+vkgLtl+h+kSHLQkYRl Pd.00g301130.m01 90 KPRLRWTAELHERFVDAVTQLGGPDKATPKAIMRTMGVKGLTLYHLKSHLQKYRL 144 79****************************************************8 PP
2	Myb_DNA-binding	76.2	4.3e-24	92	143	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+k+I+rtmg kg+tl+++ks++qky+ Pd.00g301130.m01 92 RLRWTAELHERFVDAVTQLGGPdkaTPKAIMRTMGvKGLTLYHLKSHLQKYR 143 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MEDGRHIDTC FQHKKEARPI SPNSLIYLLL FFSAFSGLRA PNPRRSLRMY SAIHSLPMDG 60 SICGHGEFSG SLDGTNLPGD ACLVLTTDPK PRLRWTAELH ERFVDAVTQL GGPDKATPKA 120 IMRTMGVKGL TLYHLKSHLQ KYRLGKQSCK DSAENSKDGI AASCIAESQD TGSSSATSSR 180 VIAQDLNDGY QVTEALRVQM EVQRRLHEQL EVQRRLQLRI EAQGKYLQSI LEKACKALND 240 QAASAAGLEA AKEELSELAI KVSNDSEGIT PLDTMKMPSL SEIAAALENR NASNVLAWLG 300 NCSVDSCLAS TGSPVSPMDM SSLAAAMKKR QRPFFGNGDS LPLEGNMRQE VEWMMSNIG

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MEDGRHIDTC FQHKKEARPI SPNSLIYLLL FFSAFSGLRA PNPRRSLRMY SAIHSLPMDG  60
SICGHGEFSG SLDGTNLPGD ACLVLTTDPK PRLRWTAELH ERFVDAVTQL GGPDKATPKA  120
IMRTMGVKGL TLYHLKSHLQ KYRLGKQSCK DSAENSKDGI AASCIAESQD TGSSSATSSR  180
VIAQDLNDGY QVTEALRVQM EVQRRLHEQL EVQRRLQLRI EAQGKYLQSI LEKACKALND  240
QAASAAGLEA AKEELSELAI KVSNDSEGIT PLDTMKMPSL SEIAAALENR NASNVLAWLG  300
NCSVDSCLAS TGSPVSPMDM SSLAAAMKKR QRPFFGNGDS LPLEGNMRQE VEWMMSNIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-121	G2-like family protein