PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g292430.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 208aa MW: 23278.8 Da PI: 6.6458 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 41 | 3.5e-13 | 161 | 206 | 36 | 82 |
EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 l +d++g +W++++iyr+ ++r++lt+GW+ F ++++L +gD v+F Pd.00g292430.m01 161 LA-KDLHGLEWRFRHIYRGPPRRHLLTTGWSIFISQKNLVSGDAVLF 206 44.89****************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MEFAAIWTVS CCLRFEKQDG VVLMATTGNL KQIDEALQRP GRMDRVFHLQ SPVTEVEKSA 60 YCNGDCDKVG GGCVYCLSSS MDCDKVGGIV SSSPFSSMEM PTFDLQPQIF CKVVNTNVNS 120 LCILPYRISN IANKENDEVY THVTLLPQPE LVGTNLDGKE LAKDLHGLEW RFRHIYRGPP 180 RRHLLTTGWS IFISQKNLVS GDAVLFLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60450.1 | 4e-29 | ARF family protein |