PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g289670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 266aa    MW: 30588.7 Da    PI: 8.8377
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g289670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS107.81.5e-33115238196
              GRAS  38 mqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlq 130
                       mqRlaa f+ ALa rl+++++++ kal+  ++++k + ++  a+ +f +++ +l f++ +  +++l+a++ e+ +Hi+D++   +  W++Llq
  Pd.00g289670.m01   1 MQRLAARFAFALAVRLVKNWPGIHKALNYDTKRPKLELDQ--ARVIFTKAFLYLGFAYAIIARTLLQAMSAERVIHIVDLGSADPKLWAPLLQ 91 
                       8*******************************98666666..5668*********************************************** PP

              GRAS 131 aLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                       ++a+ p+gpp+l+iT v+     +k  le++g +L k Ae+l++pf++n+l   +l +l+ ++L+v
  Pd.00g289670.m01  92 SFAALPNGPPHLKITCVHG----NKAVLEKLGPKLVKEAEALDMPFQYNPL-NVSLRELTKDMLKV 152
                       *******************....99*************************6.77899999999998 PP
2GRAS101.61.1e-31151265254374
              GRAS 254 lerflealeyysalfdsleak...lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk 343
                         rf+e l+yysa+fdslea+   l++ seer ++E++ +grei+n+va egaer+erhe+++ W  r+ e+GFkpv+l  + +++ k     
  Pd.00g289670.m01 151 KVRFIEGLHYYSAIFDSLEASfggLSSSSEERFVLEEM-FGREIENIVAWEGAEREERHERYAWWMVRFCEVGFKPVRLWLDSMEDSK----- 237
                       569****************9933344555999999999.****************************************999998875..... PP

              GRAS 344 vksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                          +gy++ +++ sl+++W++rpL++vSaW+
  Pd.00g289670.m01 238 ---KGYKIISQRTSLMICWNERPLYAVSAWT 265
                       ...79*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MQRLAARFAF ALAVRLVKNW PGIHKALNYD TKRPKLELDQ ARVIFTKAFL YLGFAYAIIA  60
RTLLQAMSAE RVIHIVDLGS ADPKLWAPLL QSFAALPNGP PHLKITCVHG NKAVLEKLGP  120
KLVKEAEALD MPFQYNPLNV SLRELTKDML KVRFIEGLHY YSAIFDSLEA SFGGLSSSSE  180
ERFVLEEMFG REIENIVAWE GAEREERHER YAWWMVRFCE VGFKPVRLWL DSMEDSKKGY  240
KIISQRTSLM ICWNERPLYA VSAWTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.17e-34GRAS family protein