PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g275030.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 739aa MW: 81354.3 Da PI: 7.8814

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g275030.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.6	1e-31	258	311	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Pd.00g275030.m01 258 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 311 9****************************************************7 PP
2	Myb_DNA-binding	47.6	3.8e-15	259	310	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Pd.00g275030.m01 259 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 310 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MPHEKGISEA AGSCRLSLNP IPDLSLHISP PNANTNKNAN SAPSSICTDH RTNEAPNHHE 60 SGSCFDIWRR DMDGDGLINK SHSDSCVRRG SCSLVAAADH DTELSLANPT ASEAESRWRK 120 NYFNTRGGGG EVPERLKPIK GIPVYNCPPT NCSFPPNLEE QTHYSRVDRD QRDDFDSNKL 180 RLYLSNSLRP AAPAANSCSG MGTGFESAMS RTVGGVSGGP NYSYNYNSDL PSNGFIMRSR 240 FTPTKLSQNI NKRNMRAPRM RWTTSLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA 300 HVKSHLQMYR TVKNTDKPLG SSDGSGDEDL LSTTTTHHHN SSALLNQRGA SNLEHDMEHH 360 HHPSSNNLWG NSSSRGAWLQ AGSMDRNGLR PEMVSHHTIT SGNQFESPKD ERQQRGPVVR 420 VPTAIVPWKS SSSSPVDQEV AARRALAKLR VVQDDDENSV RQFSIFGTPR GETLFTQSWT 480 PVSVNVRGVV ILMHGLNEHS GRYSDFAKQL NSNGFKVYGM DWIGHGGSEG LHAYVPSLDY 540 AVTDMKSFLE KVLAENPGLP CFCFGHSTGA AIILKAMLDP KVESRIEGVV LTSPAVGVQP 600 SHPIFVVIAP IASFLLPRYQ ISAANKKGMP VSRDPAALVA KYSDPLVYTG SIRVRTGYEI 660 LRITSYLQQN LSKLRVPFLV LHGTADTVTD PEASQKLYNE ASSTDKSIKL FDGLLHDLLF 720 EPEREAIAKD IIDWLNQRI

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MPHEKGISEA AGSCRLSLNP IPDLSLHISP PNANTNKNAN SAPSSICTDH RTNEAPNHHE  60
SGSCFDIWRR DMDGDGLINK SHSDSCVRRG SCSLVAAADH DTELSLANPT ASEAESRWRK  120
NYFNTRGGGG EVPERLKPIK GIPVYNCPPT NCSFPPNLEE QTHYSRVDRD QRDDFDSNKL  180
RLYLSNSLRP AAPAANSCSG MGTGFESAMS RTVGGVSGGP NYSYNYNSDL PSNGFIMRSR  240
FTPTKLSQNI NKRNMRAPRM RWTTSLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA  300
HVKSHLQMYR TVKNTDKPLG SSDGSGDEDL LSTTTTHHHN SSALLNQRGA SNLEHDMEHH  360
HHPSSNNLWG NSSSRGAWLQ AGSMDRNGLR PEMVSHHTIT SGNQFESPKD ERQQRGPVVR  420
VPTAIVPWKS SSSSPVDQEV AARRALAKLR VVQDDDENSV RQFSIFGTPR GETLFTQSWT  480
PVSVNVRGVV ILMHGLNEHS GRYSDFAKQL NSNGFKVYGM DWIGHGGSEG LHAYVPSLDY  540
AVTDMKSFLE KVLAENPGLP CFCFGHSTGA AIILKAMLDP KVESRIEGVV LTSPAVGVQP  600
SHPIFVVIAP IASFLLPRYQ ISAANKKGMP VSRDPAALVA KYSDPLVYTG SIRVRTGYEI  660
LRITSYLQQN LSKLRVPFLV LHGTADTVTD PEASQKLYNE ASSTDKSIKL FDGLLHDLLF  720
EPEREAIAKD IIDWLNQRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-37	G2-like family protein