PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g270920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 530aa    MW: 58607.7 Da    PI: 6.1435
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g270920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.86.3e-071944126
              FAR1  1 kfYneYAkevGFsvrkskskkskrng 26
                      +fYn+YAk+vGFsvr+sk+kk+k++ 
  Pd.00g270920.m01 19 EFYNDYAKDVGFSVRISKEKKKKETS 44
                      6*****************99997664 PP
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    
MIKKPKAGLA FKSLDETYEF YNDYAKDVGF SVRISKEKKK KETSFTFFPP LTHSLASSSS  60
SIKGLMDSNN LGGGVDAKGM DDLKEPLLKP LDINNKDKRI RTVKFKIGDI ECASCATTIE  120
SVLGKLDGVK NATVSPIQGQ AAVNYIPELI NAKKIKEAIE DAGFPVDEFP EQDVAVTRLR  180
IKGMACTSCS ESVESALRMI AGVKNAVVGL ALEEAKIHFD PSLTDTSCII QAIEDAGFGA  240
DLISSGNDVN KVHLKLEGVN SQEDMSIVQS SLESVEGVNN VEVDFAEKKV TIAYDSNLTG  300
PRSLIHCVEK AGHDLKLYQA SLYVPPRRRE AEQKHEIQMY RNQFFLSCLF SVPIFFFSMV  360
LPMLPPYGNW LEYKVHNTLT VGMLLRWILC TPVQFIVGRR FYVGSYHALR RRSANMDVLV  420
ALGTNVAYFY SVYIAMKALA LDKFEGQDFF ETSSMLISFI LLGKFLEVIA KGKTSDALAK  480
LTDLAPDTAY LLSLDDDGNV ISEMEISTQL IQRNDILKIV PGAKFLLMGL