PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g270360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 581aa MW: 65916 Da PI: 6.059

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g270360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100	2.5e-31	81	168	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s ++s+r+g+i++r+ vCs+eg+r++ ++ +++r+r++tr+gCka+++vkk+++g+w v+kl++eHnHel+p Pd.00g270360.m01 81 FYNSYARRIGFSTRVSVYQRSRRDGSIICRQVVCSREGFRRDGGEN--RSKRQRTVTRVGCKAQMTVKKQSSGRWAVSKLVKEHNHELVP 168 9***************************************9988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MDFEPLNIEN EAVEFDMGGS GEDDATGLDL EHPDDSYDIF DDDLVQSSNS TRSRDDLACG 60 DPNLEPYEGM EFDSEQASRI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QVVCSREGFR 120 RDGGENRSKR QRTVTRVGCK AQMTVKKQSS GRWAVSKLVK EHNHELVPPD KVHCLRSHRH 180 VSGPARSLID TLQAAGMGPS GVMSVLIKES GGINNVGFTK VDCQNYMSSS RQRTLGSGAA 240 MSTRHPVSIT TDQDRIIRAA VRQVFPGTRH RFCKWNVLRE AQEKLSDIYH SHPTFEAEFQ 300 RCINMTETID EFESSWESLL QRYDIGDNEW LQSMYDARQQ WVPVFLRDTF FGEMSVTQGS 360 DNINSYFDGY INASTNIQVL IKQYEKAIAT RHEKEVKADY DTMNISPILR TPSPMEKQAA 420 KLYTRVVFMK FQEELVETLA YPATMVDDTG SETLYRVAKF GEDHKVYFVR EAIKYVEEGA 480 ESVRVYNVAM DALHEAASEV TAAKKHGLGV VQSTSINCSQ QLQSCTVDQD KKIKELAAEL 540 DIASQQCEAY RAKLLAILKD MEEQKLKISV NVRNVRLNLR S

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MDFEPLNIEN EAVEFDMGGS GEDDATGLDL EHPDDSYDIF DDDLVQSSNS TRSRDDLACG  60
DPNLEPYEGM EFDSEQASRI FYNSYARRIG FSTRVSVYQR SRRDGSIICR QVVCSREGFR  120
RDGGENRSKR QRTVTRVGCK AQMTVKKQSS GRWAVSKLVK EHNHELVPPD KVHCLRSHRH  180
VSGPARSLID TLQAAGMGPS GVMSVLIKES GGINNVGFTK VDCQNYMSSS RQRTLGSGAA  240
MSTRHPVSIT TDQDRIIRAA VRQVFPGTRH RFCKWNVLRE AQEKLSDIYH SHPTFEAEFQ  300
RCINMTETID EFESSWESLL QRYDIGDNEW LQSMYDARQQ WVPVFLRDTF FGEMSVTQGS  360
DNINSYFDGY INASTNIQVL IKQYEKAIAT RHEKEVKADY DTMNISPILR TPSPMEKQAA  420
KLYTRVVFMK FQEELVETLA YPATMVDDTG SETLYRVAKF GEDHKVYFVR EAIKYVEEGA  480
ESVRVYNVAM DALHEAASEV TAAKKHGLGV VQSTSINCSQ QLQSCTVDQD KKIKELAAEL  540
DIASQQCEAY RAKLLAILKD MEEQKLKISV NVRNVRLNLR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-104	FAR1 family protein