PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g269640.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 284aa MW: 32058 Da PI: 9.9056 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+ +v+++G g+W + +++ g+ R++k+c++rw++yl Pd.00g269640.m01 15 KGPWTPAEDQKLLAYVQKYGHGNWQSLPQKAGLQRCGKSCRLRWRNYL 62 79*********************************************7 PP | |||||||
2 | Myb_DNA-binding | 46.4 | 9.2e-15 | 68 | 111 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ Ed +++++++lG++ W++Ia++++ +Rt++++k++w++ Pd.00g269640.m01 68 RGNFSLLEDRTIIQLHALLGNR-WSAIAAHLP-KRTDNEVKNYWHS 111 899*******************.*********.***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MRKSTHSVAS SGMKKGPWTP AEDQKLLAYV QKYGHGNWQS LPQKAGLQRC GKSCRLRWRN 60 YLRPDIRRGN FSLLEDRTII QLHALLGNRW SAIAAHLPKR TDNEVKNYWH SRLKKLLALK 120 GYDPVTHKPK TTIFGSANGS TDDRKTGSNL NHIAQWESAR LQAEARFVRD SELHKQAQNL 180 YDNNDISTAS SILLGHNKDF GPTDQLFGQN TPQCLDILRA WESILISNYS KATGGQDHIN 240 SFGNGLAGHF EPPIISAISR SNESSLMDRF FHEPVGQCFD ENYG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 2e-81 | MYB family protein |