PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g268580.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 338aa    MW: 37860.3 Da    PI: 6.7749
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g268580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.81.1e-14421171699
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                         lpkkf+ +h +k  ++++++lede+g+++e k+     +  + l++GW++F  +++L egD+v+F+++  s+f  +v ++r+
  Pd.00g268580.m01  42 SGLPKKFCCDHLLK--QDTMIVLEDENGEEFETKY--LAEK--VGLSGGWRGFSMSHKLLEGDIVIFHVVTPSRF--KVYIIRS 117
                       479********887..7789***************..4444..55***********************8876888..8888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MAVLQNQKHS SSSDPPPPSK SNRGRLPKNK VVSANPKVPE RSGLPKKFCC DHLLKQDTMI  60
VLEDENGEEF ETKYLAEKVG LSGGWRGFSM SHKLLEGDIV IFHVVTPSRF KVYIIRSSGL  120
DEADCTVGLT RLDACIKQMD AGHIISCERE ESGNLEPIPE DHAIAFNTKY RPLSDQSEND  180
SEDLGFEVLD GLGLSESVVP FKEMYCMDNF NVLVNGLNIN SEFSKYILNK YYELCCSQNS  240
FLHEHLLEGL NCKLIVGVIS ETINIADAIR ACKITTSEGY FSTWNKTLIA FEGLGMNVRF  300
LRARLDQLAI LASKSKRFKE ARLEELRGKA FGSKRGHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-24B3 family protein