PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g266740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 795aa MW: 87158.1 Da PI: 5.9752

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g266740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.8	7e-16	497	535	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk Pd.00g266740.m01 497 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 535 689**********************************96 PP
2	TCR	50.5	4.1e-16	583	621	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN Pd.00g266740.m01 583 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 621 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 795 aa Download sequence
MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV 60 SAHKESRFLR RHNTSDPSKP ESSLESGNKV SANEDAAQLY INSEELREDC VPGVSTGEDS 120 VEPSSEHSKF VIELPRNLKY DCGSPDCRPT TSCGTEAHCE LEVADLSAPL VPYVQKTSKE 180 GSSNDEAHLQ IICQTLQRKE GTGCDWESLI SDAADLLIFD SPNGTEAFKG LMQNSLDPAT 240 RFCTSLAPQL TQNDDNDEQN VQVLDIVGSG GQLETEDPSS QYGEASQLER TEQMEDHLNN 300 CMVSSQSEKE DNTVETPMQF NCKPAVLNLQ RGLRRRCLDF EMAGARRKSL DNVSNSSSNM 360 LSQSDEKITT NDKQLVPMKP GGESSRCILP GIGLHLNALA KTSKDYKIIK CESLAYGRQL 420 SLPNSTADIH SPTGGQGPGH ESFSSASSER DMDGTENGVQ LAHDASQEPS FLANEEFNQN 480 SPKKKRRRFE HAGETESCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCQE CFNKPIHEDT 540 VLATRKQIES RNPLAFAPKV IRSSDSVPEL GQEESSKTPA SARHKRGCNC KKSSCLKKYC 600 ECYQGGVGCS ISCRCEGCKN AFGRKDGSFI GTEAELDEEE AEACEKSVAE KHQQKIEIQK 660 NEDQRLDSAL PTTPLRLSRQ MVSLPFSSKN KPPRSSVFSI GGSSSGLYTS QKLGKPNILR 720 PESKFERHSQ TVPEDEMPEI LQGDGSPSTG VKTASPNSKR VCPPNSDFGP SPGRRTGRKL 780 ILQSIPSFPS LTPQH

Sequence ? help Back to Top

Protein Sequence Length: 795 aa Download sequence

MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV  60
SAHKESRFLR RHNTSDPSKP ESSLESGNKV SANEDAAQLY INSEELREDC VPGVSTGEDS  120
VEPSSEHSKF VIELPRNLKY DCGSPDCRPT TSCGTEAHCE LEVADLSAPL VPYVQKTSKE  180
GSSNDEAHLQ IICQTLQRKE GTGCDWESLI SDAADLLIFD SPNGTEAFKG LMQNSLDPAT  240
RFCTSLAPQL TQNDDNDEQN VQVLDIVGSG GQLETEDPSS QYGEASQLER TEQMEDHLNN  300
CMVSSQSEKE DNTVETPMQF NCKPAVLNLQ RGLRRRCLDF EMAGARRKSL DNVSNSSSNM  360
LSQSDEKITT NDKQLVPMKP GGESSRCILP GIGLHLNALA KTSKDYKIIK CESLAYGRQL  420
SLPNSTADIH SPTGGQGPGH ESFSSASSER DMDGTENGVQ LAHDASQEPS FLANEEFNQN  480
SPKKKRRRFE HAGETESCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCQE CFNKPIHEDT  540
VLATRKQIES RNPLAFAPKV IRSSDSVPEL GQEESSKTPA SARHKRGCNC KKSSCLKKYC  600
ECYQGGVGCS ISCRCEGCKN AFGRKDGSFI GTEAELDEEE AEACEKSVAE KHQQKIEIQK  660
NEDQRLDSAL PTTPLRLSRQ MVSLPFSSKN KPPRSSVFSI GGSSSGLYTS QKLGKPNILR  720
PESKFERHSQ TVPEDEMPEI LQGDGSPSTG VKTASPNSKR VCPPNSDFGP SPGRRTGRKL  780
ILQSIPSFPS LTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	483	488	KKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-146	CPP family protein