PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g261210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 161aa MW: 18325 Da PI: 10.7362 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.6 | 1.2e-31 | 24 | 73 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ Pd.00g261210.m01 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 73 79***********************************************8 PP | |||||||
2 | K-box | 68.7 | 1.9e-23 | 95 | 154 | 11 | 70 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 + +e +qe++kL+++i+++q+++Rh+lGe L++L++keL++Le +Lek++++iRskK Pd.00g261210.m01 95 GSVSEANTQESSKLRRQIREIQNSNRHILGEALSTLNIKELKNLEGRLEKGISRIRSKKV 154 455677899*************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MEFPNQAPES SSQRKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL 60 IVFSTRGRLY EYANNSVRAT IDRYKKACTD STNGGSVSEA NTQESSKLRR QIREIQNSNR 120 HILGEALSTL NIKELKNLEG RLEKGISRIR SKKVVHFPTL I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58780.1 | 2e-75 | MIKC_MADS family protein |