PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g260460.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 248aa MW: 28720.3 Da PI: 7.0352 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 6.7e-16 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++ + +G g W+ ++ + g++R++k+c++rw++yl Pd.00g260460.m01 10 KGAWTKEEDGLLIKCMENHGEGKWHEVPYKAGLNRCRKSCRLRWLNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.7 | 3.1e-14 | 63 | 106 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T++E +l+++++k+lG++ W++Ia +++ gRt + +k++w++ Pd.00g260460.m01 63 RGQFTEDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTSNGVKNYWHT 106 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MEGNNLDVKK GAWTKEEDGL LIKCMENHGE GKWHEVPYKA GLNRCRKSCR LRWLNYLKPN 60 IKRGQFTEDE VDLIIRLHKL LGNRWSLIAG RLPGRTSNGV KNYWHTRLRT NSLVKRTTKE 120 KFQETINPIV IRPQPRSFTK SSNFLSFKEP ILDHTQLEKN FSTPSQTSTS TSTRIGSDWW 180 ETFLDDKDDA TERATGSGLG LDEELLASFW VDDDMPQSAR TCINFSEEEL SMSDFAFNLD 240 LWNQSKEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 1e-58 | MYB family protein |