PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g260460.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 248aa    MW: 28720.3 Da    PI: 7.0352
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g260460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding506.7e-161057148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd ll+++ + +G g W+ ++ + g++R++k+c++rw++yl
  Pd.00g260460.m01 10 KGAWTKEEDGLLIKCMENHGEGKWHEVPYKAGLNRCRKSCRLRWLNYL 57
                      79********************************************97 PP

2Myb_DNA-binding44.73.1e-1463106146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg +T++E +l+++++k+lG++ W++Ia +++ gRt + +k++w++
  Pd.00g260460.m01  63 RGQFTEDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTSNGVKNYWHT 106
                       899*******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEGNNLDVKK GAWTKEEDGL LIKCMENHGE GKWHEVPYKA GLNRCRKSCR LRWLNYLKPN  60
IKRGQFTEDE VDLIIRLHKL LGNRWSLIAG RLPGRTSNGV KNYWHTRLRT NSLVKRTTKE  120
KFQETINPIV IRPQPRSFTK SSNFLSFKEP ILDHTQLEKN FSTPSQTSTS TSTRIGSDWW  180
ETFLDDKDDA TERATGSGLG LDEELLASFW VDDDMPQSAR TCINFSEEEL SMSDFAFNLD  240
LWNQSKEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.11e-58MYB family protein