PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g260110.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 420aa MW: 47424.9 Da PI: 7.1339

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g260110.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.1	2.6e-30	245	299	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW+++LHe+Fve+v++LGG++kAtPk+il++m ++gLt+ hvkSHLQkYR+ Pd.00g260110.m01 245 KTRIRWNQDLHEKFVECVNRLGGADKATPKAILRMMCLDGLTIFHVKSHLQKYRI 299 68****************************************************7 PP
2	Myb_DNA-binding	45.6	1.7e-14	249	298	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW ++++e++v++v++lGg t+k+I r+m g+t ++ks++qky+ Pd.00g260110.m01 249 RWNQDLHEKFVECVNRLGGAdkaTPKAILRMMClDGLTIFHVKSHLQKYR 298 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MNAQKIDCQE RIIQQSHGLI SDFNFELGSQ SSQILDLQQA WNMGIWVQQP TEDQPNMSQL 60 QNHGLPRSPS SIMSRFESPA SAFYATERCM GFSQYHSHVG NSQFPSGQTY NESYSSMDSS 120 EQADPNLDIR NTLQSIVKSQ PSSYHQYQKS SEKPNQIPLP SNNLFEHQQN KLHGESTASV 180 RRPSLSLPPK ENQDQAVGCN SFSTSPVTQL SFFPQQVKQS PRISSGNVST TYGDSPSTSP 240 VLSSKTRIRW NQDLHEKFVE CVNRLGGADK ATPKAILRMM CLDGLTIFHV KSHLQKYRIA 300 KYLPDTAEGK SEKRTTLNVE PQFDMKTGLQ IKEALQLQLD VQRRLHEQLE IQRNLQLRIE 360 EQGKQLKKMF DLQQKTSNDL FKTQNLDITC HEDAPSDSLN AIQVSSPEDS GNSNFPSKIS

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MNAQKIDCQE RIIQQSHGLI SDFNFELGSQ SSQILDLQQA WNMGIWVQQP TEDQPNMSQL  60
QNHGLPRSPS SIMSRFESPA SAFYATERCM GFSQYHSHVG NSQFPSGQTY NESYSSMDSS  120
EQADPNLDIR NTLQSIVKSQ PSSYHQYQKS SEKPNQIPLP SNNLFEHQQN KLHGESTASV  180
RRPSLSLPPK ENQDQAVGCN SFSTSPVTQL SFFPQQVKQS PRISSGNVST TYGDSPSTSP  240
VLSSKTRIRW NQDLHEKFVE CVNRLGGADK ATPKAILRMM CLDGLTIFHV KSHLQKYRIA  300
KYLPDTAEGK SEKRTTLNVE PQFDMKTGLQ IKEALQLQLD VQRRLHEQLE IQRNLQLRIE  360
EQGKQLKKMF DLQQKTSNDL FKTQNLDITC HEDAPSDSLN AIQVSSPEDS GNSNFPSKIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	1e-74	G2-like family protein