PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g256900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 332aa    MW: 37556.1 Da    PI: 7.3148
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g256900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM117.21.6e-36461881128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk... 79 
                       lp+G++F+Ptd+el+ e+L++kvegk+      +   +    +i+   +i++++P++Lp  v+ +  + +fF++ +k+y+tg+rk+r+++   
  Pd.00g256900.m01  46 LPAGVKFDPTDQELI-EHLEAKVEGKDtkshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtec 133
                       799************.99*********6665443...133333666646**********.555666799******************733345 PP

               NAM  80 .....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                            + +W++tgk+++v++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  Pd.00g256900.m01 134 dlqggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188
                       55544778************.999***********5547999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MNKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI  60
EHLEAKVEGK DTKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN  180
WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNCAMDIH QLKSDHFSFA PFRKSFDEVG  240
IGGEASTARE GPASGTCEEM RGEHHHQRSA QQQQQQHHKM GARSASGLEE LIMGCTSSSN  300
VKEESSMPNP QEAEWMKYSS FWPDPDNPDH HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-143NAC family protein