PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g251830.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 330aa MW: 37597.2 Da PI: 5.0616 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 70.2 | 5.4e-22 | 10 | 141 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatg 87 +GfrFhPtd+el++++L kk+ +k+ + ++++++++ + ++ePw + ++++yfFs+ ++ +++g+r +r + + g+W++ Pd.00g251830.m01 10 VGFRFHPTDQELISYFLYKKAVAKEplmASYSNIVHDFNlLGETEPWVVWDifgGPDLIDEDLYFFSELKNLSPKGSRIKRkIEAGGTWSEAF 102 7*******************888886765556679999725689***9964233223356799******************5555899**998 PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++k +++g+ +g kk L + + + ++ +W+++ey+l Pd.00g251830.m01 103 SKKVYDETTGNPIGRKKNLRYEN--EGCEHHGKWLLEEYSL 141 865555559999********983..4444589*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MTNYSGNRLV GFRFHPTDQE LISYFLYKKA VAKEPLMASY SNIVHDFNLL GETEPWVVWD 60 IFGGPDLIDE DLYFFSELKN LSPKGSRIKR KIEAGGTWSE AFSKKVYDET TGNPIGRKKN 120 LRYENEGCEH HGKWLLEEYS LVDQETQKIV LCRLKKNNRV WNKINNSTQE LKEKPSNKKA 180 RKGLGSPRIK IEDEEPHRTS GLSSVYNNLD QELIINTNYN AISNNICGDN QDNMLMTSDF 240 ASDPVCFDYG GLTDEEYVFD VNELLATVEP QPLSLVLPQM AETLEPLLSS GLGDDRAVEA 300 WNSSGLENIY ATNKKTSHIG SRVKKYFENL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 8e-15 | NAC family protein |