PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g250390.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 990aa MW: 108840 Da PI: 7.3443

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g250390.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.9	1.9e-18	423	523	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ + Pd.00g250390.m02 423 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPIKIQDVKGNEWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PG 513 99************************555556667***********99899999999.*******************887.77 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++lv++++++ Pd.00g250390.m02 514 GRLVMGFRKA 523 7788877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 990 aa Download sequence
MDGVITSQVV FKIWVLQIWT KKGVEFGIMG SKICMNVLCG TTNTHEWKKG WPLRSGGFAH 60 LCFKCGAAYE KLVYCDKFHA GESGWRDCSL CRKPLHCGCI VSKSLYEFLD YGGVGCISCA 120 KSSQPRVIQN DDVLNGFGGL KISNYSDRQS TAVQNGAFSN TVDEGKLLQL CKIMEANESN 180 LLPQPQRGDI NVSLVQKKQE EVINHKGEVG LGFSSTTQPS IGSLTFSKSE NGRTMIEDMH 240 KSSSQPSLSM TLGSPSATPS FVQPFPGGLV DGREQSKTPS SFQQGHGREQ GTTPSFQQGL 300 VDGREQSKTS SSFQQGLVDG REHSKTPSSF QQGLVDGREQ SKTPSSSFQQ GQKSRPILPK 360 PLKPGVTMSS ETNKGGFPNV RVARPPAEGR GKNQLLPRYW PRITDQELQK LSGDLNSTIV 420 PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQSEGLPI KIQDVKGNEW MFQFRFWPNN 480 NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRI DPGGRLVMGF RKASKSLDMQ DPQTSILPNG 540 STPGETSCPS VVENPATGSG HPGLFQTNTG SKDPHLHALS EHLHLTDGDM SLHRNDYHGH 600 RTSEDLLQQP VSNSDKKRAR NIGPKSKRLL MHSEDVLELR LTWEEAQDLL RPPPSVKPSI 660 VTIEDHEFEE YDEPPVFGKR SLFIASSSER QEQWAQCDDC SKWRRLPADV LLPPKWTCSE 720 NSWDTSRRLC SAPEEMSQKD FDSLLRASKD LKKRRIIENC TETQGHEPSG LDALASAAIL 780 GDNVVDSGEQ SVGATTRHPR HRPGCTCIVC IQPPSGKGKH KPTCTCNVCL TVRRRFKTLM 840 MRKKKRQSER EAENAQKDNN NHKDESEING TSTEVGLHMN HSSENGGCQS RIEADVAESS 900 TAGQIDLNCE PNPYVQASGL TLSRLADAVS QPLNNYMKES CLANMMCEPQ AGIGSSLLTQ 960 ATDESERRLS NEGCLSAVAA WDCEGRGDAD

Sequence ? help Back to Top

Protein Sequence Length: 990 aa Download sequence

MDGVITSQVV FKIWVLQIWT KKGVEFGIMG SKICMNVLCG TTNTHEWKKG WPLRSGGFAH  60
LCFKCGAAYE KLVYCDKFHA GESGWRDCSL CRKPLHCGCI VSKSLYEFLD YGGVGCISCA  120
KSSQPRVIQN DDVLNGFGGL KISNYSDRQS TAVQNGAFSN TVDEGKLLQL CKIMEANESN  180
LLPQPQRGDI NVSLVQKKQE EVINHKGEVG LGFSSTTQPS IGSLTFSKSE NGRTMIEDMH  240
KSSSQPSLSM TLGSPSATPS FVQPFPGGLV DGREQSKTPS SFQQGHGREQ GTTPSFQQGL  300
VDGREQSKTS SSFQQGLVDG REHSKTPSSF QQGLVDGREQ SKTPSSSFQQ GQKSRPILPK  360
PLKPGVTMSS ETNKGGFPNV RVARPPAEGR GKNQLLPRYW PRITDQELQK LSGDLNSTIV  420
PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQSEGLPI KIQDVKGNEW MFQFRFWPNN  480
NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRI DPGGRLVMGF RKASKSLDMQ DPQTSILPNG  540
STPGETSCPS VVENPATGSG HPGLFQTNTG SKDPHLHALS EHLHLTDGDM SLHRNDYHGH  600
RTSEDLLQQP VSNSDKKRAR NIGPKSKRLL MHSEDVLELR LTWEEAQDLL RPPPSVKPSI  660
VTIEDHEFEE YDEPPVFGKR SLFIASSSER QEQWAQCDDC SKWRRLPADV LLPPKWTCSE  720
NSWDTSRRLC SAPEEMSQKD FDSLLRASKD LKKRRIIENC TETQGHEPSG LDALASAAIL  780
GDNVVDSGEQ SVGATTRHPR HRPGCTCIVC IQPPSGKGKH KPTCTCNVCL TVRRRFKTLM  840
MRKKKRQSER EAENAQKDNN NHKDESEING TSTEVGLHMN HSSENGGCQS RIEADVAESS  900
TAGQIDLNCE PNPYVQASGL TLSRLADAVS QPLNNYMKES CLANMMCEPQ AGIGSSLLTQ  960
ATDESERRLS NEGCLSAVAA WDCEGRGDAD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	833	844	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein