PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g246220.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 649aa MW: 75277.2 Da PI: 5.9801

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g246220.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.5	1.6e-21	69	160	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g i+kr+fvC+++g++ +kk t +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel Pd.00g246220.m02 69 EYYGNFARKNGFSIRKERSRLSPQLG-IYKRDFVCYRSGFAPVKKKPTGEHHRDRKSVRCGCDAKMYLSKEVvdgVSQWFVVQFSNVHNHELL 160 59******************8888.***************************************99867789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MTSPPSKNIW IRRQQCPCGD WKCYVTYEGD SEETSSITSQ LVKNDSTGSE AMVSPYVGMV 60 FKSDDDAFEY YGNFARKNGF SIRKERSRLS PQLGIYKRDF VCYRSGFAPV KKKPTGEHHR 120 DRKSVRCGCD AKMYLSKEVV DGVSQWFVVQ FSNVHNHELL EDDQVRLLPA YRKIHEADQE 180 RILLLSKAGF PIHRIVKVLE LEKGIQGGQL PFLERDVRNF VQNRKKVVQE NDALLTEKRE 240 NNTLELLEAC KGTKEADEDF VYDFTVDEND KVEHIAWSYG DSVHAYTMFG DAVYFDTSYQ 300 SITYGVLFGA WLGIDNHGRT IFFGCVLLQD ETPRSFSWAL QTFVRFMRGR CPQTILTDLD 360 PGLRDAIRSE LPGTKHVVSI WNILPKVSSW FSVSLGSRCA EFKSEFDVLY RVENTEDFEL 420 QWNQMISMFG LTTDKHIALL YSFRASWALS YMKGYFLACM ATTTYSKSVD AFLKGVFSAQ 480 TCLRSFFEQH ELVLAMQYAV SEMSNGSYLV RHFKEIDGER LVIWIPEEEQ IHCSCKEFES 540 SGLLCRHSLR VFVVKNYFQL PDKYYLNRWR KESSLDFYDD HITRTSDDEW FQDYHCLTET 600 LFTESSITKE RADYVRRELT TQLTRILNEV RNMPECEGVA MDLTFSPTG

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MTSPPSKNIW IRRQQCPCGD WKCYVTYEGD SEETSSITSQ LVKNDSTGSE AMVSPYVGMV  60
FKSDDDAFEY YGNFARKNGF SIRKERSRLS PQLGIYKRDF VCYRSGFAPV KKKPTGEHHR  120
DRKSVRCGCD AKMYLSKEVV DGVSQWFVVQ FSNVHNHELL EDDQVRLLPA YRKIHEADQE  180
RILLLSKAGF PIHRIVKVLE LEKGIQGGQL PFLERDVRNF VQNRKKVVQE NDALLTEKRE  240
NNTLELLEAC KGTKEADEDF VYDFTVDEND KVEHIAWSYG DSVHAYTMFG DAVYFDTSYQ  300
SITYGVLFGA WLGIDNHGRT IFFGCVLLQD ETPRSFSWAL QTFVRFMRGR CPQTILTDLD  360
PGLRDAIRSE LPGTKHVVSI WNILPKVSSW FSVSLGSRCA EFKSEFDVLY RVENTEDFEL  420
QWNQMISMFG LTTDKHIALL YSFRASWALS YMKGYFLACM ATTTYSKSVD AFLKGVFSAQ  480
TCLRSFFEQH ELVLAMQYAV SEMSNGSYLV RHFKEIDGER LVIWIPEEEQ IHCSCKEFES  540
SGLLCRHSLR VFVVKNYFQL PDKYYLNRWR KESSLDFYDD HITRTSDDEW FQDYHCLTET  600
LFTESSITKE RADYVRRELT TQLTRILNEV RNMPECEGVA MDLTFSPTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein