PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g246050.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 314aa    MW: 35582.7 Da    PI: 8.5802
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g246050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS159.33.4e-49215031180
              GRAS  31 aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGl 123
                       +s +g+p+qRl ay++e+L+arl rs+s++yk+l+++  +    +e +++++++++++P+ +f+++ aN  I ea+e+e r+HiiDf+i qG 
  Pd.00g246050.m01   2 VSVSGEPIQRLGAYMLEGLRARLERSGSSIYKTLKCEVPT---GAELMSYMSVLFQICPYWRFAYMSANVVIREALENEPRIHIIDFQIAQGS 91 
                       7899***********************************9...9************************************************* PP

              GRAS 124 QWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
                       QW++L+q La +p+gpp++RiTgv++++s   +   l+ +g+rL+++A++ +vpfefn 
  Pd.00g246050.m01  92 QWVPLIQDLARQPGGPPHIRITGVDDSQSAhaRGGGLHIVGQRLSQIANSWNVPFEFNN 150
                       **************************9988889999*********************97 PP
2GRAS186.32.1e-57156314215374
              GRAS 215 desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerre 307
                        esvs++++rd++L+lvkslsPkv+++veqe+++n+++F+ rf+e ++yy+a+f+s+++  pr++++ri+ E ++++r+ivn+vacegaer+e
  Pd.00g246050.m01 156 YESVSTQNHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFFSRFVEMVDYYTAMFESIDVARPRDDKQRISAEMHCVARDIVNMVACEGAERVE 248
                       48999**************************************************************************************** PP

              GRAS 308 rhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       rhe l+kW++rl++ GF+p+pls k+++ +++ll++++++ yr++e +g+l+lgWk+r++v+ SaWr
  Pd.00g246050.m01 249 RHELLGKWKSRLTMDGFTPYPLSPKVTEAIRSLLKEFNGN-YRLQEANGALYLGWKQRAMVTSSAWR 314
                       **************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MVSVSGEPIQ RLGAYMLEGL RARLERSGSS IYKTLKCEVP TGAELMSYMS VLFQICPYWR  60
FAYMSANVVI REALENEPRI HIIDFQIAQG SQWVPLIQDL ARQPGGPPHI RITGVDDSQS  120
AHARGGGLHI VGQRLSQIAN SWNVPFEFNN AAMSGYESVS TQNHRDRLLR LVKSLSPKVM  180
TLVEQESNTN TSPFFSRFVE MVDYYTAMFE SIDVARPRDD KQRISAEMHC VARDIVNMVA  240
CEGAERVERH ELLGKWKSRL TMDGFTPYPL SPKVTEAIRS LLKEFNGNYR LQEANGALYL  300
GWKQRAMVTS SAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.11e-160GRAS family protein