PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g245340.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 234aa MW: 26494.8 Da PI: 6.9473

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g245340.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.4e-09	161	195	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ Pd.00g245340.m01 161 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 195 569*****************************885 PP
2	ELK	41.9	2.1e-14	115	136	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ Pd.00g245340.m01 115 ELKGQLLRKYSGYLGSLKQEFM 136 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MDNNSNHDGS SSSSSSVKAK IMAHPHYHRL LASYINCQKV GAPPEVVARL EEACSSAASI 60 GQMMSSSSGS GCLGEDPALD QFMEAYCEML TKNGSSEEEV DVNNNFIDPQ AEDRELKGQL 120 LRKYSGYLGS LKQEFMKKRK KGKLPKEARQ QLLDWWSRHY KWPYPSESQK LALAESTGLD 180 QKQINNWFIN QRKRHWKPSE DMQFVVMDAT HPGHYYMDTV LGNPFPMDIS PTLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	140	LKQEFMKKRK
2	137	141	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-119	TALE family protein