PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g241890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 354aa    MW: 39533 Da    PI: 5.1117
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g241890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.91.3e-11158224162
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvlt 62 
                       f+k+l++sdv+++gr+vlpkk aee+  +++ +e+++l+++d  s ++W +k++y  ++ks++y+l+
  Pd.00g241890.m01 158 FKKELKNSDVGSLGRIVLPKKEAEENlpMLSDKEGIQLMIRDvYSDQEWGLKYKYwsNNKSRMYLLE 224
                       89**************************77777899******8888*******99877888889887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MSCSPSTTCS PSTTQYYCYP AQYLAPNPGL QFQYAYPYQQ AGQPMYPFLV SGQPNVVVST  60
EQDSLARSGW TLDALVSKAA RKERRMARQR SLSLSRNNTN AAASSPSSRR HAPFPWNEDD  120
DQGSMSTSSS GAGTDMQNIN KHLYTFCTPD NKKLRVMFKK ELKNSDVGSL GRIVLPKKEA  180
EENLPMLSDK EGIQLMIRDV YSDQEWGLKY KYWSNNKSRM YLLENTARDE EDASSSSLAL  240
LVQQLQKEQE ANTIIALSMT CASSPHIQCE EANDATGHIK TSMQSSTLAG VEPAPSPSPS  300
QRRAMTRMAN DDQFETDDCY KGLGTLPEVD RYKYCDDFCL FDYNGSIATD DDKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28300.16e-35B3 family protein