PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g241740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 377aa MW: 41043.9 Da PI: 8.026

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g241740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.6e-39	67	127	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ Pd.00g241740.m01 67 QQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 127 57899*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MLSNCDHEKM VLISSTTNEW PQMQQQQDNI QIDDHHQKGL NNNMSSSTSS PATRIMEKPG 60 QEQLQLQQQA LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGGC 120 RKNKRVKRPG SSSSSAMDGA SSSSSSVPSN TANNNNSNSN PPSQPSQIDQ INPLFYGVPS 180 NPFMDSPSSA SGFDLHQLNH HHAQLGLGFS SAGTFMSGDN YRNRFNPTSN SSLPSSNYSS 240 IFSTSPSTTT TTPTMASVLA SKFLNGGSFK DIQARGPSHN QYFQSLLPFE DLHIAAGNTG 300 EAGGAAKDVK VEDQAGQNRL EWNNNSNNNN VNGNMNCQNQ MTEQMGLSDP SLYWSSTTLG 360 ANWHDPSNLG SSVSSLI

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MLSNCDHEKM VLISSTTNEW PQMQQQQDNI QIDDHHQKGL NNNMSSSTSS PATRIMEKPG  60
QEQLQLQQQA LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGGC  120
RKNKRVKRPG SSSSSAMDGA SSSSSSVPSN TANNNNSNSN PPSQPSQIDQ INPLFYGVPS  180
NPFMDSPSSA SGFDLHQLNH HHAQLGLGFS SAGTFMSGDN YRNRFNPTSN SSLPSSNYSS  240
IFSTSPSTTT TTPTMASVLA SKFLNGGSFK DIQARGPSHN QYFQSLLPFE DLHIAAGNTG  300
EAGGAAKDVK VEDQAGQNRL EWNNNSNNNN VNGNMNCQNQ MTEQMGLSDP SLYWSSTTLG  360
ANWHDPSNLG SSVSSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	2e-35	Dof family protein