PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g241280.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WOX

Protein Properties

Length: 409aa MW: 44748.6 Da PI: 6.6454

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g241280.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.4e-18	41	101	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ Pd.00g241280.m01 41 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 101 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.1	3e-36	40	102	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k Pd.00g241280.m01 40 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 102 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MTSTLLSFQM DVTDHLTPQM FDFNYVNATV AGCEERSPEP KPRWNPKPEQ IRILEAIFNS 60 GMVNPPRDEI RKIRAQLQEY GQVGDANVFY WFQNRKSRSK HKLRHLHNSS KQQQTHHHTH 120 LPLTTPVSTS TLNIINAAAP SSSSSSSEKS SPKSAPNNKA FSMGFSSNVA AHDVSINSPT 180 ASVNQQSSFF QPHHQHHSEV LPEPFFFPMH PNPNCNFTQG FCFSELSNVV DVPNHGTHEQ 240 TNNNTGPCTS LLLSEIMSHG AAMSRKEYHQ EDEMKVMNMK NMDPHHLNYS LNVTTTSPTN 300 MVASHTTGPT TSVAVPSPMI HNIQGGVGEA GAMGAGGAEK STVFINDVAF EVGAGPFNVR 360 EAFGDDAVLI HSSGHPVLTN EWGRFITTSC SCADVNAGNS DPNEVISSS

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MTSTLLSFQM DVTDHLTPQM FDFNYVNATV AGCEERSPEP KPRWNPKPEQ IRILEAIFNS  60
GMVNPPRDEI RKIRAQLQEY GQVGDANVFY WFQNRKSRSK HKLRHLHNSS KQQQTHHHTH  120
LPLTTPVSTS TLNIINAAAP SSSSSSSEKS SPKSAPNNKA FSMGFSSNVA AHDVSINSPT  180
ASVNQQSSFF QPHHQHHSEV LPEPFFFPMH PNPNCNFTQG FCFSELSNVV DVPNHGTHEQ  240
TNNNTGPCTS LLLSEIMSHG AAMSRKEYHQ EDEMKVMNMK NMDPHHLNYS LNVTTTSPTN  300
MVASHTTGPT TSVAVPSPMI HNIQGGVGEA GAMGAGGAEK STVFINDVAF EVGAGPFNVR  360
EAFGDDAVLI HSSGHPVLTN EWGRFITTSC SCADVNAGNS DPNEVISSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-47	WOX family protein