PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g237950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SRS | ||||||||
Protein Properties | Length: 308aa MW: 33255.8 Da PI: 8.5649 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 54.1 | 6e-17 | 166 | 232 | 84 | 149 |
DUF702 84 salsstklssaeskkele.tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLyd 149 s +++ +++ +++ + + ++slP++v+++avfrc rv+++++g +elaYq++v+i+Gh ++ + y Pd.00g237950.m01 166 SVAKRPRVVVPSQNANANiKQSLPDKVRAPAVFRCHRVTAISNGAAELAYQATVKISGHEWRLCFYS 232 3333334443333333330345*************************************99877776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MLGLRDILLI APTPSMHQQN QPISSDLPLP SSTTLGVGLG IFPLLTATPC APHAPTTAEV 60 NSDSSHFWGL RRCQELNPSK QDMLNFGNHG AQNEQVVECE GHNNNIENEG GGGGESSKMK 120 ACKDCGNKAK KGCEYGRKES LIRGTISERM QKSSISLTAG SSGSSSVAKR PRVVVPSQNA 180 NANIKQSLPD KVRAPAVFRC HRVTAISNGA AELAYQATVK ISGHEWRLCF YSTSSSSNCL 240 SDFHQLRIAD RNHLCYSLML EAPPATSFVL LRFSINIEGT YGSDLLKTPG SPFFFSAVRT 300 LIVLIAFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54430.1 | 1e-11 | SRS family protein |