PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g233590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 534aa MW: 59696.6 Da PI: 6.8328 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 102.4 | 4.2e-32 | 90 | 181 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw+v+ +++eHnHel+p Pd.00g233590.m01 90 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVKEHNHELVP 181 9***************************************998888545677889***********************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 534 aa Download sequence |
MDNEVIEFDI GLGGGGGRDG DDDFVDIEHP VDDEEMVDSP LMSSATGSAS GIVVFGGGGS 60 GEIYLPEGDL LDLEPYDGME FESEEAAKAF YNSYARRVGF STRVSSSRRS RRDGAIIQRQ 120 FVCAKEGFRN LNEKRTKDRE IKRPRTITRV GCKASLSVKM QDSGKWVVSG FVKEHNHELV 180 PPDQVHCLRS HRQISGPAKT LIDTLQAAGM GPRRIMSALI KEYGGISKVG FTEFFKLYEK 240 ALESRNEKEV KADFETMNTA PVLKTPSPME KQASELYTKK IFMRFQEELV GTLTFTASKG 300 DDDGEIITYQ VAKFGEDHKA YYVKLNVLEM MATCSCQMFE FSGLLCRHVL AVFRVTNVLT 360 LPSHYILKRW TRNAKSSVML EERSSDVYTN YLESHTVRYN TLRHEAFKFV DGAKSSETYD 420 IALDALKEAA KKVAHAPKND GKTMVNGHVR GNLAGGASRI HYASGDHEGS SGQHLSEDDM 480 DKKIRELTNE LQCANRKCEV YRANLLSVLK DIEDHKLQLS IKVQNIKIGM KDGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-134 | FAR1 family protein |